Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420112
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Entry
139420112 CDS
T10872
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139420112
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139420112
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139420112
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139420112
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
139420112
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139420112
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139420112
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
139420112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
Motif
Other DBs
NCBI-GeneID:
139420112
NCBI-ProteinID:
XP_071025941
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All DBs
Position
11:217936..265892
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AA seq
745 aa
AA seq
DB search
MLRSATSALLRTSIEIRSVPRVCRFLQSLLRCPTQNRSFSLSVCLCKKKKSLWLELSEGH
KMSGNIEEILAPLRLAVKEQGELVRQMKQDGAPDVDVLKAVAELKARKRTLETKELSLQP
KDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQEEQ
ILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCPAE
NKAEMEEVVTQMDNYTQQELTDLFVKYSVKSPTTGNDVSAPHLFNLMFQTSIGPGGNMTG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPTEKFHPKFPNVADLEIILYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFIGRIY
LYLTKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLLCHAR
ATKVPLVAEKPLKEPKVVDIVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFITEQEMLL
NSSGEFTIETEGKTFKLTKDMVSVKRFQKTLHVEEVVPNVIEPSFGIGRIMYSIFEHTFQ
VREGDEQRTFFSFPTTVAPYKCSVLPLSQNQEFMPFVKELSEAMTKQGVSHKVDDSSGSI
GRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPGIIRDLANGVM
TWAEVESKYPIFEGQETSKKDTAEE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcaacatcagcactgctgaggaccagcattgagattcgctcggtgccg
agggtctgccggtttctacagtcgctgctgcgctgtccgacccaaaacaggtcgttttct
ctttcggtctgcttgtgtaaaaaaaagaaaagtctttggctggagctttccgaaggacac
aaaatgagtggcaatattgaagaaatcctcgccccactgaggctggcagtgaaagaacag
ggtgagctggtgcgccagatgaaacaggatggtgcccctgatgttgacgtccttaaagct
gtggctgaactgaaagctaggaagagaactctggaaactaaggaactgtctctgcagccc
aaagatgacattgttgacagaaccaagatggaggatacgttgaagaggagattcttctat
gaccaggccttcgctatctatggaggtgtgagtggtctgtatgactttggtcctgtgggc
tgtgccctgaagaacaacatcttgcaggcctggaggcagcacttcatccaggaggagcaa
atcctggagatcgactgcaccatgctcaccccggagcccgttctcaagacgtctggacac
gtggacaagtttgcggactacatggtgaaagacgtgaagaacggagagtgtttcagggca
gaccacctcctcaaagctcacctccagaagctgatgtctgataagaagtgtcctgcagag
aataaggccgagatggaggaagtggtcactcagatggacaactacactcaacaggagttg
actgacctctttgtgaaatacagtgtcaagtcccccaccacaggaaatgacgtttcagcc
cctcatctcttcaacctgatgttccagacgtctatcggaccagggggaaacatgacaggc
tacttgaggcctgaaacggctcagggaatcttcctcaacttcaagcgtctgttggaattc
aaccagggaaagcttcccttcgctgctgctcagatcggcaactccttcaggaacgagatc
tcacctcgctcaggactcatccgtgtcagagagttcaccatggctgagattgagcacttt
gtggacccgactgagaagttccaccccaagttccctaacgtggctgacctggagatcatc
ctgtactcctccaaggcccagaccagtggccagtctgctcacatcatgaggctgggggat
gctgtggagcagggggtgatcaataactccgtcctgggatatttcatcgggagaatctac
ctatacctcactaaagtgggtgtggccaaagacaagcttcgcttccgtcagcacatggac
aacgagatggcccactacgcctgtgactgctgggacgcagagaccaaaacatcctatggc
tggatcgagatagtgggctgtgctgaccgctcctgtttcgacctgctgtgccacgcccgg
gctaccaaggtccctctagtggccgagaagcctcttaaagaacccaaagtagtcgatatc
gtccagtttgagcccaataagggagccatcggtaaagcctataagaaggacgccaaacta
gcgatggagtacctagctgtctgtgacgagtgtttcatcactgaacaggagatgctgctc
aacagcagcggggagttcaccatagagacggagggaaagacttttaaactcaccaaggac
atggtcagtgtgaagcggtttcagaagaccctgcatgtggaggaggtggtccctaatgtc
atcgaaccctcctttggcatcggtagaatcatgtactcaatcttcgagcacacattccaa
gtcagagagggagacgaacagagaacgttcttcagcttccctaccactgttgctccgtat
aaatgctccgtccttcctttgagccaaaaccaggaattcatgccttttgttaaggaactc
tctgaagcgatgaccaaacagggcgtgtcccacaaggtggacgactcgtcaggatccatt
gggcggcgctacgccagaacagacgagatcggagtggcgttcggcatcaccatcgacttt
gacacggtgaacaagacgccccacaccgccactctgagggaccgcgactccatgaggcag
atcagggccgaggttagtgagttgccaggaatcatccgtgatctggcaaacggtgtcatg
acttgggccgaggtggagagcaagtaccccatctttgagggacaggagaccagcaagaag
gacactgctgaggaatga
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