Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420128
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Entry
139420128 CDS
T10872
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139420128
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139420128
mRNA cycle factors
Stress granule specific factors
139420128
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139420128
NCBI-ProteinID:
XP_071025972
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Position
11:3456278..3805683
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AA seq
651 aa
AA seq
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MAQVKVQTSTPLAGPGFSPLSPLGAMPSPGPLGLQPSVNGPGPTPGCLAPSAGYGPDTPV
SANSPGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLEEQ
VWEAEGTSIKKAQHSTACLALTESLLPRPAPRSPTMDVNSNPGSITPTVELNGLAMKRGE
PAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGTNEFIGEGRTRQAARH
NAATKALQALRNEPIPERPPQSPEEQKELDEGSDASKSEISLVYEIALKRNLSVCFEVLK
ESGPPHMKSFLTRVSVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFTPLVEKPKLHYK
KRPKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGIPRRREFIMQSVQVKV
CGEVATGTGPNKKVAKRNAAEAMLLQLGYKASTCPQSPTEMDDKGWNGQKTAFNETTTNT
QKGLLHLSPDVYQEMEASRKQGAPVNYLTPKLSDPLVVPLSPGHTPYYSPPAVATAAMAR
ELLMNGSGEGRSGENIGLKGKSSVQPSQQLEYLAQIQGFQVLYSDGQNGREFMTYLTLSP
VQMTFHGIGSSIEASHDQAALSALKQLSEQGLDTVDCPIKSSEVCVREDGH
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcaacgcccctggctggccctggcttctcccccctg
tctcccctcggggccatgcccagtccaggacccttgggtctacagccctcagtcaatggc
cctgggcccacccccggctgcctcgctccctcagccgggtatgggcccgacacccctgtg
tctgccaactcaccaggcccaccccaggagaacatggcaaaccctaaagagaaaactccc
atgtgtctggtgaatgagttagcccgtttcaacaggatccaaccgcagtacaagctgctc
aacgagagaggccctgcacacgctaagatctttacagtgcagctgtgtctggaggagcag
gtgtgggaggcggagggcaccagcatcaagaaggctcagcactccaccgcctgccttgcc
ctcactgagagccttctacccaggcccgctcctcgctctcctacaatggacgtcaacagc
aacccaggtagtatcacccctacggtggagctgaatggtctggctatgaagagaggtgag
ccagccatctaccgtcccctggaccccaagcccatgcccaactacagagccaactataac
ttcagaggcatgttcaaccaaaggtaccactacccagttccaaagatcttctatgtccag
ttgtctgtgggcactaatgagtttattggagagggccggactcgccaggcagcccgtcac
aacgccgccacgaaggccctgcaagccctccgcaatgaacccatacctgaacgaccacct
cagagccctgaggagcagaaggagctggatgaggggagtgatgcctctaagtcagaaatc
agtctggtttacgagatagccctcaagaggaacctgtctgtctgcttcgaggtcttgaag
gaaagcggcccccctcacatgaagagcttcctgacccgtgtgtctgtgggagagttctca
gcagagggcgaggggaacagtaagaagctgtctaagaagagggctgctctctccattctc
caggacctcaagaaactccccttcaccccgttagtggagaaacccaaactacactacaag
aaacgccccaagaccatcctcaagacaggtcctgattatggccaggggatgaaccccatc
agtagactggctcagatacagcaggccaagaaggagaaggaaccggaatacctcttgctg
tctgagagaggaatcccccgacgcagggagttcatcatgcagtctgtgcaggtgaaggtg
tgtggcgaggtagccacgggaacagggccaaataagaaggtggcgaagcggaatgctgcc
gaggccatgctactgcagctgggatacaaggcctccacctgcccacagagccctactgag
atggacgacaaaggctggaacggacaaaagacggcttttaacgaaactacgactaacacc
cagaagggtctactccacctctccccggatgtctatcaagagatggaggcgagcaggaaa
cagggggcccccgttaactacctaacccccaaactatctgatcccctggtcgtccctctg
tcccctggacacaccccctactacagcccccccgcagttgccacggcagccatggcgagg
gagctgttgatgaacgggtcaggagaggggaggtctggggagaacataggactgaagggg
aagagctctgtccagccctcacagcaactagagtacctggctcaaatacaaggcttccag
gtgctgtacagcgatggtcagaatggtagagagttcatgacctacctgacactctcacct
gtacagatgactttccacggcatcgggagctccatcgaagccagccacgaccaggctgct
ctaagtgccttgaaacagctgtcggaacagggactggacacggtggactgccctatcaag
agcagcgaggtgtgtgtcagagaggacggacactga
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