Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420142
Help
Entry
139420142 CDS
T10872
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139420142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139420142
NCBI-ProteinID:
XP_071026026
LinkDB
All DBs
Position
2:7258658..7273023
Genome browser
AA seq
733 aa
AA seq
DB search
MADNNTDQEKAIAANALEAFTAGNYEESLKHLGKLQELNKEDYKIALNKAIAEFYKSGQT
TTCTLKQTLIAMKNQVHTSMEDIDGLDDVENSLLYYNQAIIHYHMRQYSEAIAIGERLYQ
FLEPFEEKFALAVCFLLVDLYLLTYQPEKALHLLAVLEKLSVQGNNKNGKGESVNSANKD
GRNQKAEFIGMIEAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNTAGNSASSLFLKSNF
EYLRGNYRKAVKLLNSSNIAEHPGAIKTGECVRCMFWNNLGCIHFAMGKHNLGIFYFKKA
LQENDHTCAQLGDGGATGNGQSKQFSGIPMCALLANKRYELLYNCGIQLLHIGRPLAAFD
CLMDAVQVYHSNPGLWLRLAECCIAANKGSLEQDNKGLPSKKGIVQAIVGQGYHRKIILA
SQSTQNTIYSDGQSAAIPVASMEFAAICLRNGLVLLPDHQQQENKAENGSKTTSQSGSTE
SGSENSDACSGKGQEGDKFLSAAPSSPLRKQEVENLRCSLLACSAYVALVLGDNLMALNH
AEKLLHQTKLSGSLKFLGHLYAAEALISLDRISEAIGHLNPENVTDVSMGVLSSEQDQGP
DKGDLEPVESSGKQTPLCYPSTVSSARAIMLFNLGSAYCLRSEYEKARKCLHQAASMVNT
KEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVLQAPSPDTRKKPVPSSFQPVQPP
IQMPSPFTTVQRK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacaacacagaccaagaaaaagcaatagctgcaaatgcgttggaagcgttt
acggctggaaactatgaggaatctttgaaacaccttggaaagctgcaagagttgaacaag
gaggactacaagattgctttgaataaagcaatagctgaattctacaagagcggccaaacc
accacatgcaccctgaagcagactcttattgcaatgaaaaaccaggttcacacttcaatg
gaggatattgatggtttggatgatgtagaaaacagtctgctctactacaatcaagctatc
attcactaccacatgagacagtactccgaagctattgctattggagagcggctgtaccag
tttctggagccgtttgaagagaagtttgctctggcggtctgcttcttgctggtggatctg
tacctgctaacgtaccagccagagaaggccctccatctccttgctgtgctggagaaactg
tctgtacagggaaataacaagaacggcaaaggggagagtgtcaacagcgccaacaaagat
ggtcggaaccagaaggcagagttcattggcatgatcgaagcggcaaaatccaaaatgcac
cagtacaaagtgcgagcgtacattcagatgaagtcatcaaaggcctgcaaaagggagatc
aagtctgtgatgaacacagcagggaattctgcttcctcactcttcctcaagagtaacttt
gagtacctgagaggaaactaccgcaaagcagtgaagctcttaaacagctccaacatcgca
gagcaccctggggccatcaaaacaggtgaatgtgtgcgctgtatgttctggaacaacctg
ggttgcatacactttgccatggggaaacacaacctaggtatattctacttcaaaaaggcc
ctgcaggagaacgaccacacgtgtgcacagctgggggacggtggggcgacggggaacggg
caatctaagcagttctcgggcatccccatgtgtgcgctgctagccaacaagcgttatgag
ctgctgtataactgtgggatccagctgctgcacatcggccggcccctggcggccttcgac
tgtctgatggatgctgtgcaggtgtaccactctaaccctggcctctggttacggttggct
gagtgctgcattgctgccaacaagggtagcttagaacaagacaacaagggtcttccgagt
aaaaagggtatcgttcaggccatcgttgggcagggctaccatcgcaagatcatcctggca
tcacagtccacccagaacacaatctacagtgatgggcagtctgcagccattccggtggcc
agtatggagtttgcagcgatctgtctgaggaacggcctggtcctcctccctgatcaccag
cagcaggagaacaaggcagagaacggctccaagacaaccagccagtcaggcagcacagag
agcggctcagagaacagcgacgcctgcagtgggaaaggtcaagaaggagacaagttcctt
tctgcagcaccgtcttcacctctgaggaaacaggaggttgaaaacctcaggtgttccctc
ctggcctgcagtgcctacgtggccctggtgttaggagacaacctgatggccctgaaccat
gcagagaagctccttcaccagaccaagctgtctggatcactcaagttcctgggacacctg
tatgctgcagaggcccttatatccctggaccggatctcagaggccatcggtcacctcaac
ccagagaacgtcactgatgtctccatgggggtgttgtccagcgagcaggaccaagggcca
gataaaggggatctggagcctgtcgagtcatcagggaagcagactcctctgtgttacccc
agcacagtgagctcagcccgggccataatgctgttcaacctgggcagtgcctattgtctg
aggagtgagtacgagaaggcccgcaagtgcctgcatcaggccgcctccatggtgaacacc
aaggagattcctcctgaagccatcttactggctgtctacctggagctgcagaacgggaac
acacagctcgccctgcagatcatcaaacgtaaccagctcctcccgtcagtgctccaggcg
ccctctccagacacacgaaagaagcctgttccctcctctttccagcctgtccaaccaccc
atccagatgccctcacccttcacaacagtccagcgcaaatga
DBGET
integrated database retrieval system
