Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420188
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Entry
139420188 CDS
T10872
Name
(RefSeq) vesicle-associated membrane protein-associated protein A-like isoform X1
KO
K06096
vesicle-associated membrane protein-associated protein A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139420188
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
139420188
Autophagy
ER-phagy
Other ER-phagy associated proteins
139420188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Motile_Sperm
Ig_CFAP65_4th
Cep192_D6
Cep192_D3
DUF7491
ASH
Lebercilin
Kazrin
PLipase_C_C
ZapB
Motif
Other DBs
NCBI-GeneID:
139420188
NCBI-ProteinID:
XP_071026088
LinkDB
All DBs
Position
11:10593612..10599094
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AA seq
244 aa
AA seq
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MSKLEQIIVIEPPYDLKFKGPFTDVVTTNLKLKNPSDRKVCFKVKTTAPRRYCVRPNSGM
IESGATVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPSTATDMDAVWKDATPDDFMDSKLR
CVFELPTDNDKMDDVDATKAAPVLNSNADGTSAPKPISASVDDSEIKKLMDECKRLQYDV
GKLSDENRQLKDEGLRMRKAHRSDNIVSSSGATMSKQHSSSSLPSLLVVIAAIFIGFFLG
KFVL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattggagcagatcatagttattgaaccgccgtatgatctcaaatttaaaggt
cccttcacagatgtagtgaccacaaacctcaagctcaaaaatccctctgaccgaaaagta
tgcttcaaagtgaagactacggcacctcgccggtactgtgtaaggcccaacagcggcatg
attgagtcaggagcgactgtcaccgtctctgtaatgctgcagccctttgactatgacccc
aatgaaaaaagtaaacacaaattcatggtacagacaatctttgcaccatccactgctaca
gacatggatgcagtgtggaaagatgcaacgccagatgatttcatggactccaagctgaga
tgtgtgttcgaactgcccactgacaacgataaaatggatgatgttgatgcaaccaaagct
gcccccgtcctcaactccaacgctgacggcacgtcggcgcccaagccaatcagcgcgtcc
gtggacgactctgagataaagaaactgatggacgagtgcaagaggctgcagtatgatgtg
ggcaaactctcagacgagaacagacaactcaaggacgagggcctgaggatgaggaaggcc
caccggtcagacaacatagtctccagctcgggcgccacgatgagcaaacagcattcttcc
agttcccttccctcgctactggtcgtcatagcagccatcttcatcggattcttcctaggg
aagtttgtcttgtag
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