Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420192
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Entry
139420192 CDS
T10872
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139420192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139420192
03036 Chromosome and associated proteins [BR:
ocla03036
]
139420192
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
139420192
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
139420192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
139420192
NCBI-ProteinID:
XP_071026108
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Position
11:complement(10812948..10938482)
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AA seq
666 aa
AA seq
DB search
MMQAEDRKKIKLSVSSSKGVVEEYCLRERPKEDAAKMKNKVTSTQAVIGKKKAWSWEQYL
GEEKAIAVPLRLFTEAQSFPSSRSGFKAGMRLEGIDPLHPSMFCVLSVAEVIGYRLRLHI
DGYSECYDFWLNADSADIRPAGWCESTGHKLHPPKGYNEVEFNWDKYQESCNAPAAPQNL
FESHNSTTSTSKFQVGMKLEAVDRKNPCLVCVASVADIVDNRFLVHFDNWDDTYDYWCDA
SSPHIHPVGWCQDHGRPLTAPQGHPNPEHFLWEEYLEDNGSTSVPSQAFCMRAPHSFPVN
MKLETVDRRNPMLVRVATVSDTEDYRVKIHFDGWHEKFDFWVDSDLPDLHPVGWCARTGH
PLEPPLSHAGSSDLKSSVTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEAV
LPDRLGGEKQITFVPVHFVQKTKRLCTADDQEEATPPQDVPMETRVMLSGYEGAARLRGR
PPANPLVKREPREEPATAQGQKLLSLGKRGRLPSRLTTKYLRVKEEDEEIDLNSMIEESS
LDSLQQALHQSVFLSAMSAQPGRDLPLCWEQHCKLLPGVAGLQASCVAHWTVDEVADFIH
SLPGCDEQANQFKEEQIDGKALLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSA
AGNANT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggcagaggataggaagaaaataaaactgagtgtgagttccagcaaaggcgtg
gtggaggaatattgtctgagagagcgaccaaaagaggacgcagcaaaaatgaagaacaaa
gtgaccagcacacaagcagtgattggtaagaagaaggcctggtcgtgggaacagtacctg
ggagaggagaaggccatagcagttcccctcagactgttcactgaggcccagtcgttcccc
tcgagcagaagtggcttcaaggctgggatgaggctggaggggatcgaccctctccacccc
tccatgttctgtgtcctgtctgtggcagaggtgattggctaccgattgcggctccacatc
gacggctactctgaatgctatgacttctggttaaacgccgactctgccgacatcaggcca
gccggatggtgcgagtcgacaggacacaagctccacccaccaaaaggctacaacgaagtc
gagtttaactgggataaataccaagagtcttgtaacgctccagctgcaccacagaatctg
tttgaatctcataacagtaccacgagcacctctaagtttcaggtgggcatgaaactggag
gcagtggacaggaagaacccgtgcctggtgtgtgtggcctcggtggccgacatcgtggac
aatcgcttcctggttcactttgacaactgggacgacacctacgactactggtgtgatgcc
agcagccctcacatccacccagtgggctggtgccaggaccacggacgacctctcactgca
cctcagggacaccccaatccagaacatttcctgtgggaggagtacttagaagacaatggt
tccacgtcagttccaagccaggctttctgtatgagagctcctcacagtttcccggtgaac
atgaaactggagacggtggataggaggaaccccatgctggtccgtgtggccaccgtctca
gacactgaagactacagggtcaagatccattttgatggctggcatgagaagtttgacttc
tgggtggactctgacctgccggaccttcaccctgtgggctggtgtgcccggacaggtcac
cccctggaaccccccctctcacatgcaggatcttctgaccttaagagctccgtgacccag
ggagtgtgtcccaccccgggctgcaggggcgtgggccacatcaaaggggccaaatacaca
ggacaccacagtgcctttggctgtccctactctgacatcaacatgaagaaggaggccgtg
ctgcccgaccgcctgggcggcgagaagcagatcacctttgtccctgtgcactttgtccag
aagaccaagaggctgtgcaccgccgatgatcaggaggaagccacgccaccccaggatgtt
cccatggagaccagggtaatgctgtcggggtacgagggggctgctcgcctcagaggtcgc
cccccagccaaccccctggtgaagagagagcccagggaggaaccagccacggctcaggga
cagaaactgctttctctggggaagagaggccggctacccagcagactcacaactaaatat
ctgcgagtcaaagaagaggacgaagagattgacttgaatagcatgatcgaagagagcagt
ctggatagcctgcagcaggccctccaccagtctgtgttcctgtcggccatgtcggctcaa
cccggacgggacctacccctgtgctgggagcagcactgcaagctgctgcctggggtggcc
ggattgcaggccagctgcgtggcccactggaccgtggatgaggtggctgacttcatccac
tctctccccggctgcgatgaacaagccaatcagttcaaagaggagcaaatcgacgggaag
gccttgttgctgctgacccagcgcgacatcgtcaagatcatgagtgtaaaactcggccct
gccctcaagatctacaactctatcttaatgttcaagcacgctgaggacaaccaatcggca
gccggcaacgccaacacatga
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