KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420192
Entry
139420192         CDS       T10872                                 
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
  KO
K24387  lethal(3)malignant brain tumor-like protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    139420192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139420192
   03036 Chromosome and associated proteins [BR:ocla03036]
    139420192
Transcription factors [BR:ocla03000]
 Eukaryotic type
  Zinc finger
   Cys2HisCys zinc factors
    139420192
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     139420192
SSDB
Motif
Pfam: MBT zf-C2HC SAM_1 SAM_2 MSL3_chromo-like SAM_PNT
Other DBs
NCBI-GeneID: 139420192
NCBI-ProteinID: XP_071026108
LinkDB
Position
11:complement(10812948..10938482)
AA seq 666 aa
MMQAEDRKKIKLSVSSSKGVVEEYCLRERPKEDAAKMKNKVTSTQAVIGKKKAWSWEQYL
GEEKAIAVPLRLFTEAQSFPSSRSGFKAGMRLEGIDPLHPSMFCVLSVAEVIGYRLRLHI
DGYSECYDFWLNADSADIRPAGWCESTGHKLHPPKGYNEVEFNWDKYQESCNAPAAPQNL
FESHNSTTSTSKFQVGMKLEAVDRKNPCLVCVASVADIVDNRFLVHFDNWDDTYDYWCDA
SSPHIHPVGWCQDHGRPLTAPQGHPNPEHFLWEEYLEDNGSTSVPSQAFCMRAPHSFPVN
MKLETVDRRNPMLVRVATVSDTEDYRVKIHFDGWHEKFDFWVDSDLPDLHPVGWCARTGH
PLEPPLSHAGSSDLKSSVTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEAV
LPDRLGGEKQITFVPVHFVQKTKRLCTADDQEEATPPQDVPMETRVMLSGYEGAARLRGR
PPANPLVKREPREEPATAQGQKLLSLGKRGRLPSRLTTKYLRVKEEDEEIDLNSMIEESS
LDSLQQALHQSVFLSAMSAQPGRDLPLCWEQHCKLLPGVAGLQASCVAHWTVDEVADFIH
SLPGCDEQANQFKEEQIDGKALLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSA
AGNANT
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgatgcaggcagaggataggaagaaaataaaactgagtgtgagttccagcaaaggcgtg
gtggaggaatattgtctgagagagcgaccaaaagaggacgcagcaaaaatgaagaacaaa
gtgaccagcacacaagcagtgattggtaagaagaaggcctggtcgtgggaacagtacctg
ggagaggagaaggccatagcagttcccctcagactgttcactgaggcccagtcgttcccc
tcgagcagaagtggcttcaaggctgggatgaggctggaggggatcgaccctctccacccc
tccatgttctgtgtcctgtctgtggcagaggtgattggctaccgattgcggctccacatc
gacggctactctgaatgctatgacttctggttaaacgccgactctgccgacatcaggcca
gccggatggtgcgagtcgacaggacacaagctccacccaccaaaaggctacaacgaagtc
gagtttaactgggataaataccaagagtcttgtaacgctccagctgcaccacagaatctg
tttgaatctcataacagtaccacgagcacctctaagtttcaggtgggcatgaaactggag
gcagtggacaggaagaacccgtgcctggtgtgtgtggcctcggtggccgacatcgtggac
aatcgcttcctggttcactttgacaactgggacgacacctacgactactggtgtgatgcc
agcagccctcacatccacccagtgggctggtgccaggaccacggacgacctctcactgca
cctcagggacaccccaatccagaacatttcctgtgggaggagtacttagaagacaatggt
tccacgtcagttccaagccaggctttctgtatgagagctcctcacagtttcccggtgaac
atgaaactggagacggtggataggaggaaccccatgctggtccgtgtggccaccgtctca
gacactgaagactacagggtcaagatccattttgatggctggcatgagaagtttgacttc
tgggtggactctgacctgccggaccttcaccctgtgggctggtgtgcccggacaggtcac
cccctggaaccccccctctcacatgcaggatcttctgaccttaagagctccgtgacccag
ggagtgtgtcccaccccgggctgcaggggcgtgggccacatcaaaggggccaaatacaca
ggacaccacagtgcctttggctgtccctactctgacatcaacatgaagaaggaggccgtg
ctgcccgaccgcctgggcggcgagaagcagatcacctttgtccctgtgcactttgtccag
aagaccaagaggctgtgcaccgccgatgatcaggaggaagccacgccaccccaggatgtt
cccatggagaccagggtaatgctgtcggggtacgagggggctgctcgcctcagaggtcgc
cccccagccaaccccctggtgaagagagagcccagggaggaaccagccacggctcaggga
cagaaactgctttctctggggaagagaggccggctacccagcagactcacaactaaatat
ctgcgagtcaaagaagaggacgaagagattgacttgaatagcatgatcgaagagagcagt
ctggatagcctgcagcaggccctccaccagtctgtgttcctgtcggccatgtcggctcaa
cccggacgggacctacccctgtgctgggagcagcactgcaagctgctgcctggggtggcc
ggattgcaggccagctgcgtggcccactggaccgtggatgaggtggctgacttcatccac
tctctccccggctgcgatgaacaagccaatcagttcaaagaggagcaaatcgacgggaag
gccttgttgctgctgacccagcgcgacatcgtcaagatcatgagtgtaaaactcggccct
gccctcaagatctacaactctatcttaatgttcaagcacgctgaggacaaccaatcggca
gccggcaacgccaacacatga

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