Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420367
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Entry
139420367 CDS
T10872
Name
(RefSeq) ATP-binding cassette sub-family D member 3-like
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010
ABC transporters
ocla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139420367
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139420367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139420367
Enzymes [BR:
ocla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
139420367
Transporters [BR:
ocla02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
139420367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
BrxL_ATPase
AAA_29
AAA_21
Rad17
nSTAND1
AAA_16
AAA_27
Motif
Other DBs
NCBI-GeneID:
139420367
NCBI-ProteinID:
XP_071026494
LinkDB
All DBs
Position
11:22244859..22257816
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AA seq
660 aa
AA seq
DB search
MAAVSKYFTAKNSSIAGGVLLALCILKQRRRGGKSSGTKGGSELVLSNEDKAAKKDRAAV
DYVFFLRISKILRIMVPRWFCKETGYLLFIAAMLVTRTYCDVWMIQNGTMIESAIIVRNN
ADFKNYLFKCCKAMPIFALVNNLLKLGLNELKLKFRERLTKHLYDEYLKGYTYYKMGNLD
NRIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTSSIGAQGPSSMMAYLLI
SGLFLTRLRKPIGKMTVIEQRYEGEYRYVNSRLITNSEEIAFYNGNLREKQTIHSTFKKL
VDHLHKFIFFRFSMGFVDSMVAKYMATVVGYLVVSRPFLNLSDPRHMNSTQAELMEDYYQ
SGRMLLSLAQALGRIVLAGRDMTRLSGFTMRITELRKVLKELNSGKYERTMVSHQNKESL
GVERVTLVPGSGQIINVDHIIKFEHTPLATPNGDVLIKDLTFEVRSGTNVLVCGPNGCGK
SSLFRVLGELWPLFGGQLTKPERGKLFYVPQRPYMPIGTLRDQVIYPDTYEEQKRKGISD
QVLKEYLGNVQLGHILDREGTWDTVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTS
AVSVDVEDFIYSHCRTVGISLFTVSHRKSLWKHHEYYLHMDGRGNYDFKPITEETIEFGS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtcagtaaatattttacagctaaaaactcctcgatagctgggggagtccta
ctcgctttatgcatcctgaagcaaagaagaagaggaggcaagtcaagcggtacaaaaggg
ggctcagaactggtgttgagcaatgaagacaaagcagctaagaaagaccgggcggcggtg
gactatgtcttcttcctcagaatcagcaagatcctccggatcatggtgcctcgatggttc
tgcaaagagactggataccttctcttcatcgctgctatgctggtgacccggacatactgt
gacgtatggatgatccagaacggaaccatgattgaaagtgcaattatcgttcgcaacaac
gccgatttcaagaactacttgttcaagtgttgcaaagctatgccaatttttgccttggtg
aataacctcttgaagctgggtctgaacgagctgaagctgaagttcagagagaggctgact
aaacatctctacgacgagtacctcaaaggatacacgtactacaaaatgggcaacctggat
aaccgcattgccaacgctgaccagctgctgactcaagacgtagagaagttttgtaacagt
gtggttgacctctactccaatctcagcaagcctctcttggacattggactgtacatcttc
aagctgacgtcttccatcggagcccagggcccatcgagtatgatggcctacctgctgatc
tcaggcctgttcctgaccagactgcggaagcccatcggtaagatgactgtcattgagcag
cgctacgagggagagtaccgatacgtcaactcacgactcatcaccaacagtgaggagatt
gccttctacaatggcaatttgagagagaaacagacgattcattcaacatttaagaaattg
gtcgaccatttgcataagttcatcttcttccgcttctctatgggctttgtagacagcatg
gtcgccaagtacatggccaccgtggtgggctacctggtggtgagtcggcccttcctcaac
ctgtccgacccccgccacatgaacagcacccaagctgagctgatggaagactattaccag
agtggcaggatgctgctgagtctggcccaggctctgggaaggatcgtactggctggcaga
gatatgaccaggctttccgggttcaccatgcgtatcactgagctcaggaaggtcctgaaa
gaactgaactctgggaaatacgagcgtaccatggtctcccatcagaacaaagaatcatta
ggtgtagaaagagtcacactggtcccgggcagcggacagatcatcaacgtagaccacatc
atcaagtttgaacacacaccactagcaacacccaatggagatgtactgatcaaggacctg
acctttgaagtgcggtctggtaccaacgtgttagtgtgtgggcccaatggctgtggcaag
agctcactcttcagagtactgggagagctctggcctctgttcggagggcagctgaccaag
cctgagcgagggaagctcttctatgttcctcagagaccctacatgcccattggcacgctg
agggatcaggtgatctaccctgacacctatgaggagcaaaagaggaaaggcatctctgac
caggtgctgaaggagtacctgggcaacgtccagttaggtcacatcctggacagagagggg
acttgggacaccgtgcaggactggatggatgtcctcagtggaggagagaagcagaggatg
gcgatggcaaggttgttctaccacaaacctcagtttgccatcttggatgagtgcaccagt
gctgtgagtgtagacgtggaggacttcatctacagtcactgcagaacggttggcatcagt
ctgttcactgtctctcacagaaagtctttgtggaaacaccatgagtactaccttcacatg
gacggaagagggaactacgacttcaaacctatcactgaggagaccatagagtttggctcc
tag
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