Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420393
Help
Entry
139420393 CDS
T10872
Name
(RefSeq) cyclic nucleotide-gated channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139420393
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
139420393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
139420393
NCBI-ProteinID:
XP_071026546
LinkDB
All DBs
Position
11:24214923..24252050
Genome browser
AA seq
759 aa
AA seq
DB search
MFGKLKALFSVPEPPPKPDATAAPATAPAPAPAPAPAPAPPAKEEEKPAEKKDEEKKEEE
PKKEEAKPADPAPAPAPAPAPAPTPAPAPAPAAAPAPAPAEGDKPADGAEGEEQPPPPPP
PVVYSRYADDTLREVVKRLRDRTNTYKERAIDPYATTPEISPPITPVLRKSDYLRKKEAE
RIKAEEDAIKKAEADAIKAVEMAKKKEEKAKADAEKKEAERLKKQEEEQAARDASICPMI
SFSFIDTTLQPVEDAMDSVLGNTIDPFTDRKYIAWITLVSLAFNYNAWFTPVRLVFPIHT
PVSVPFWIFADILADSVNVIDIVLWQPRLQFVKGGDIIKDRTVTKLHYREISRFNLDMIS
IIPFELLGIPFGFSALYRLNRLLRIDMFFEFSDRLESIMAKAYIWRVGRTTGYLLYMLHL
NACFYYVASVYLGIGTSKWVYDGDGTAYLRCYYFAVRSLINIGGLPEPGTVFEICFQMTN
FFTGVFVFSSLIGQMRDVIGAATQGQTYFRASMDGCVEYMNTFTIPDLVQNRVRTWYNYT
WDAQGMLDESVLLEQMPLVMRTAIGVDVNFATFDKIALFQGCDKQMLVDMLLRLKSIIYL
PGDFVVKKGDIGKEMYIIKGGEVQVVGGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRR
TANVKAHGFVNLFVLDKKDLVDILVHYPNSQRVLAKKGRKLMKAKGPAGAKGEVDKTKGM
ALFGPKPPTPKMARIFGGFGKGGFLEKLKAAQAKEQQGK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaagctcaaagcactgttctcggtgcccgagccacctccgaagccggatgcc
actgctgctcctgccacggctcctgcccccgcaccagctcccgctcctgccccagcacct
ccagcaaaggaagaggagaagcctgcagagaaaaaggatgaggagaagaaagaggaagaa
cctaagaaggaggaggctaaaccagcagatcctgccccagctccagccccagctccagcc
cctgcccctaccccagccccagccccagccccggccgctgccccagcacctgcacctgca
gaaggggacaaacccgctgatggggctgaaggtgaagagcagccccctcctcctcctcca
ccggttgtgtacagcaggtatgcagatgacacactccgggaagttgtcaaacggctaaga
gaccggacaaatacctacaaagagagagccattgacccctatgctaccacacctgaaatc
agcccccctatcaccccggtcttgaggaaatcagactacctgaggaagaaggaggcagag
aggataaaagcagaggaggatgcaataaaaaaagcagaagcagatgcgataaaggcagta
gagatggcaaagaaaaaggaggagaaagcaaaggcagatgcggagaagaaggaggcagag
cggctgaagaaacaggaggaggagcaggcagctagagatgcatccatttgtcccatgatc
agcttttccttcattgacactacgctccaaccagttgaagacgccatggactcagtgctt
ggtaacaccatagatccattcacagatcgcaagtatattgcttggataacacttgtaagt
ttggcattcaactacaacgcttggtttacaccagttcgtttggtctttcccatccacact
ccagtgtccgttcctttctggatatttgctgacattcttgcagacagtgtcaatgtcata
gatatcgtcctctggcaaccccgactgcagtttgtgaaaggaggagacattattaaagac
cggactgtgacgaagctacattatcgagagatttcaaggtttaacttggatatgatcagc
atcatcccattcgaactgctcggtatcccgtttggattctctgctttatacagactcaac
cgtctactgaggatagacatgtttttcgagttcagcgatcggcttgagagtatcatggcc
aaggcttacatctggagagttggtcgaactactggctacttgctgtacatgctccatctc
aatgcctgtttctactatgtggcgtcagtgtaccttggcatcggcacctccaaatgggtc
tacgatggagatggaaccgcgtacctgcgttgttattacttcgctgttcgtagtctgatc
aacatcgggggtcttcctgagcctggcactgtgtttgagatctgtttccagatgaccaac
ttctttactggtgtctttgtgttctccagtttgattggacagatgagagatgtcatcggg
gctgccacgcagggccagacatatttccgggcctccatggacggctgtgtggaatacatg
aacactttcaccatccccgacttggtgcagaacagagtacgcacctggtacaactacacc
tgggacgcccagggaatgctggacgagtctgtactgctggagcagatgcctcttgtaatg
agaacagccattggtgtggatgtaaactttgccaccttcgataaaattgctctttttcag
ggctgtgataagcagatgttggtagacatgttgctgaggctcaagtctattatatatcta
cctggggactttgtggtgaagaagggtgacattggtaaagagatgtacatcataaagggt
ggagaggtgcaggtggttggtggaccagataactccattgtgtttgtgacgctgaaggcc
ggctgtgtgtttggagaaatcagtctgctacagtctgccaaagatggcgggaacagaagg
actgctaacgtaaaagctcatggctttgtcaacctttttgtcctggataagaaagacctg
gttgacatcttggtccactacccaaattcccagagagtgctggccaagaaaggaaggaaa
ctgatgaaggcgaagggtccagctggtgctaagggtgaggttgacaagacgaaaggaatg
gcgctgtttggacccaaaccccccactcctaaaatggcgcgcatctttggaggctttggc
aaaggaggcttcttggagaaactcaaggctgcacaagcgaaggagcagcaggggaagtaa
DBGET
integrated database retrieval system
