Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420423
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Entry
139420423 CDS
T10872
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139420423
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
139420423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
Zn_SUZ12
zf-C2H2_6
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
139420423
NCBI-ProteinID:
XP_071026635
LinkDB
All DBs
Position
11:complement(27618149..27685850)
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AA seq
1214 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDGSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTAHKVGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPLQE
QLPLNQIKSEPVDYEYKAMVLSPATTGGNSHGGGVLNGVAAGPLQGAVQAVMLPTMGLVS
PISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDG
NATKIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPQAQPLSEVAIEPCSKAQQRLPED
LTLSRPPRSKEEKMEEENEKEEGEDTTKTCLLCGDCPGGLDVLHALEHCKKASGLRINGD
KSESAIASLLSEGVGNQPKNLLSLLKAYFALNAEPTKEELSKISDSVSLPTDVVKKWFDK
MQSSQVSLGAPTPPSEEEGPLSESPGATVVSPKVRPEQDTEGPTMMQSGPAEATPAEVNG
SMRSPASPTPLNLTAGGPVPAKPSSSDSTDGPLDLSFPKPTREEAAAAATYLASVYSHQD
EPLNLTKTCTTKKELPLAGAAGHHVTSQPVSLYTASPQSANPISIMTTQLPSGTIYAITD
QGRAGMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQD
TSSEGVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEALE
GSQGGIGEEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEE
EGEEEDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEEEAEGEKEEDTGREEGENE
EEQGVERVVVGGEGEEGEEEEGVVGVEVKEEQEEEEVTGKKADTRQEEVQENREKEEEHG
GEKEQAEEHVEEELSEKEETMDTEKGLTSEDKEESGSRAAEESEVMKENEGETNRNTVSE
DKNQTPTGEKGDPN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctt
cacatcgtggaggaggacgggagtctggcagatggggcagactgtgacagtaatgtgccc
agtgaagatcacaacggagacggctcagatgaagcgagggaggagtgtggttcagacggg
gaggacgatggcaggacggacgctctggtggaagagatgctgcagcagggagacacggcc
gtcatttacccagaagccccggaggacgagccacgccaagggacccccgaggccagcgga
catgacgagaatggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagttggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaaaccgtacgagtgctccaactgcaagaagcgc
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcggcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagcc
atgcccgcctcgccctcctccaccacacgcacacagatctgggataaacctttacaggag
caactacccctaaatcagatcaagagcgagccagtggactatgagtacaaggccatggtg
ttgtctccagcaacgacaggaggaaacagtcatggaggaggggtgttaaacggggttgca
gcgggccccctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtatct
cccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggacggtaac
atgatcagacagatgttggagaacaatgccaaggcagcggggaccggcacaggggcgacg
ggtgttcctcaccagcagctcatctcagccatcagtctccccatcatcggtcaggacggc
aacgccaccaagatcatcatcaactacagcctcgatcccagccagacccagctcactgcc
cagaacctgaagaaggaacctcagaccctggctacaatgccaggccagccccaggctcag
cccctgtccgaggttgctatagagccctgcagcaaggcccagcagagactcccagaggac
ctgacactcagcaggccccccaggagcaaagaggagaagatggaagaggaaaacgagaag
gaggagggggaggataccactaagacctgtctgctctgtggcgactgccccggtggtctg
gacgtgctccacgcactcgagcactgtaagaaggcctcaggcctcaggatcaatggggac
aaatcagagtcggccatcgcctcgttactgtccgagggggtcgggaaccagcccaagaac
ctcctgtccctcctcaaggcctacttcgccctaaacgctgagccaaccaaggaggagctc
agcaagatctcagattcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaag
atgcagagcagtcaggtctcactaggagctccgacacctccgtctgaggaagagggaccc
ttgtctgagagtcctggggccacagttgtgtcccctaaggtaagaccagagcaggacaca
gagggtcccaccatgatgcagtccggcccagccgaggccactccggctgaggttaacggc
tccatgcgctccccagcctcccccacaccactaaacctgaccgccggggggcccgtccca
gccaaaccctcctcctcggacagcactgatggccctctggacctgtcgtttccaaagccc
acccgagaggaggccgcagccgccgccacttacctcgcctctgtttactcccatcaggac
gaacccctgaacttgacgaagacttgcacaacaaagaaagaacttccgctcgccggcgcc
gctggccaccatgtgactagtcaacctgtgtccctgtacaccgccagcccacaaagtgcc
aaccccatcagtatcatgaccactcagctgcccagcgggaccatttatgccatcactgac
cagggccgtgcaggcatgccctgcctccgggcagttaccactagtaacaaccagactatc
ctcatcccacagctggcctatacctataccactacagctacagccaacagccctgcaggg
acagagacacaggagaagaccacactgcaagtcaacggcatcaaggaggagcgtcaggac
accagctcagagggcgtgtccaccatggaagagctgaacgactcagactccgccccttcc
aggaagaaaatgaggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagctctctgctccgacataaatacgaacacacaggcaagcgaccccac
gagtgcggtatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactctggggagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactcg
ggctcctactcccagcacatgaaccaccgttactcctattgcaagaaagaggcgctggaa
ggaagtcaaggaggtataggggaggaggtgctggaggaggagatggagagccctgtgggg
ttggccctgggccttggaggggagcagcaggagcagtcagacagcaggcccacctcctcc
cacctggactctgacgagcgagggagcagcaccagggaggacgaggaggagagcgaggag
gagggggaggaggaggacatggagacagcggcaggggaggaggttgagggggatccggac
agagttctggatatggatgatatacaggtggtgcggataggagacgagggaggggacgag
gaggaagaggcggagggggagaaggaagaagacactggtcgagaggagggagagaatgag
gaagagcagggagtggagagagtagtggtcgggggtgaaggggaggaaggagaagaagag
gagggggtagtgggggttgaagtaaaggaggagcaggaggaagaggaggttacagggaaa
aaagcagacacaaggcaagaggaggtacaggagaacagggagaaagaggaggaacatgga
ggtgagaaggaacaggctgaggagcatgtggaggaagagctgtctgagaaggaagagaca
atggacacagagaaaggattgacctcggaggacaaggaagagtcagggtcaagggcggcg
gaggaaagtgaggtcatgaaagagaatgaaggtgaaacaaacaggaacactgtttcagaa
gacaagaaccagacaccgacaggagagaaaggagatccgaattaa
DBGET
integrated database retrieval system
