Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420440
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Entry
139420440 CDS
T10872
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139420440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139420440
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139420440
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139420440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
139420440
NCBI-ProteinID:
XP_071026682
LinkDB
All DBs
Position
11:complement(32884883..32924781)
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AA seq
1089 aa
AA seq
DB search
MSFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGY
HDRKQQYAIQRGNFDRCVCQAQSEGGPPISDAASLSLLTRQLLFFYRQSEDSQRLIWICQ
NLVKYNGQFVKLLAGPERQTCVFQIKRVLGFCCRLLQTCKDDSLNVAVPMRMLEIYSSER
TYLPVLQDVNCVASLIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPSGVHAIPLAG
TLLEHTLKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDPRLHFPFE
AFLGSLQATVVSSAAAQKQAPWLFYFVLSAGETCLGSLSEEGLQLYLRALQTLLPLLPVS
ESTSRPEVISDSEDEEDTDIQAPSTQHDGYRISVQLITEECVHKLDTKQQTNALLNLVWR
DSASEEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLIQSMTTKMITGS
MVPLLQVISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGYPMEGHGHSNTSM
MPFTLSELVTLSRLLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAE
QKRWVQLFKVITNLVKMVKARDIRRPFCPAGHWLAEEVNIRADKVTQLYVPSARHVWRTR
RMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQ
GDGPFLDGINVTIRRNYIYEDAYDKLSPENEADLKKRIRVHLLNAHGLDEAGIDGGGIFR
EFLNELLKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENML
VELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEEDVEDLGLNFTIVNNDL
GEAQVVELKPGGKDIPVSTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRM
FDQQEIQVLISGAHVPICLDDLKTFTNYSGGYTATHPVITIFWEVVESFTDEEKRKLLKF
VTSCSRPPLLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAI
ESSAGFELS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagttttgagggagatttcaaaacaagacccaaggtgtctcttgggggagcg
agtaaaaaggaggaaaaagcatctctcctacaccggacacaagaggaaaggagaaaaaga
gaggatgaaagacgaagactgaagaatgcaattatcattcaatcctatatacgaggatac
catgaccgaaaacagcaatatgccatccagaggggcaactttgaccgctgcgtctgtcag
gcacagtcagaaggtggaccgccaatctccgacgctgccagtcttagtctcttaacaagg
caactgctatttttctatagacagagtgaggactctcagagattgatatggatttgtcag
aacctagtgaaatacaatgggcagtttgtgaagctgctggcggggcccgaaagacagacg
tgtgtgtttcagatcaagagggtcctgggcttctgctgcagacttctgcaaacctgcaag
gatgacagtttgaatgttgccgttcccatgaggatgctggagatctattcctcagagaga
acctatctccctgtccttcaagacgttaattgtgtggcatcgttaatcgagcagattttg
cactatatggtacagaaaggatactacaggtcgctttatattctagtgaatcacaagctc
ccttccagtctggagtacagtgatgctccctctggagtgcacgcgatccccttggcaggc
acactgctggagcacacgctgaagcccctgcactttacctattcctcctgcacaacaggc
gcaaggcagtttgtgtttgcagccttcacggaggagttcatctcggcgccgttcacggag
cagatctttcacttctttattccggcgctgtccgacccgcgcctccacttcccctttgag
gccttcctgggctccctgcaggccactgtagtctcctccgcagcggcgcagaaacaggcg
ccgtggctcttctactttgtcctctcagccggggagacgtgcctgggttccctatcagag
gagggcctccagctatacctgcgtgctctgcagaccctcctacctctccttcccgtgtca
gagagcaccagcaggccggaggtcatcagtgactctgaggacgaggaggacactgacatc
caggctccgtccacacagcacgacggttatcggatatcggtgcagctgatcacggaggag
tgcgtccacaaactggacaccaagcagcagaccaacgcgctgctcaacctggtgtggagg
gactctgccagcgaagaggtcttcaccatgatggcctccatttgccacactctcatggtg
cagcaccgcatgatggtgcctaaagtcaggcttctgtacagtttagcgttcaacgcacgt
ttcctgagacatctctggcacctgatacagtccatgactaccaaaatgattacagggtcc
atggttcccctgctgcaggtcatctcccgggggtctcccatgtctctggaagactccaat
cgcatcattcccctcttctatctcttcagttccctcttcagtcactcgctcatctctgtg
cacgacagcgagttctttggctaccccatggaaggtcatggccacagcaatacgtccatg
atgccgttcacattgtccgagctggtcaccctgtctcgattactaagagacgcttgtctg
ggcattatcaagctggcctacccagagaccaagacggagcaccgcgaggagtacatggcc
gccttccgcagcgtgggggtcaagacaaacacagaggtgcagcagcgcatccaggccgag
cagaaacgttgggtccagctcttcaaggtcatcactaacttggtaaagatggtgaaggct
cgtgacatcagacgaccattctgtccagcaggccattggctggctgaagaggtcaacatc
cgagcagataaggtgacccagttgtacgtcccgtcagccagacacgtgtggaggacgcgg
aggatgggacgcatcgggcccctgcagtccacactggatgtggggatggagcctccacag
ctgtctgtgtctgaggagagacacttggccatcctgactgagctgccctttgtcgtgccc
tttgaggagcgagtcaagatcttccagagactgatatacgcggacaagcgggacgtccag
ggagacgggccgtttctggacgggatcaacgtcaccatcagacggaactacatctacgag
gacgcctacgacaagctctccccagaaaacgaggcggacctgaagaaacgtatccgggtg
cacctgctcaacgcccacggcctggacgaggcgggcatcgatggagggggcatcttccgt
gaattcctcaacgagctgctcaagtcgggcttcaaccccaaccaggggttcttcaagacc
accaacgagggccttctctaccccagccccaccgcccagatgctggtgggagactccttc
gccagacactactacttcctgggacggatactggggaaggcactgtatgagaacatgctg
gttgagctgccatttgccagtttcttcctgtccaagctgctgggaaccagtgcagacgtg
gacatccaccacctggcctcgctggaccccgagatgtaccgcaacctgctcttcctcaag
agctacgaggaagacgtggaggacctgggactcaacttcaccattgtcaacaacgacctg
ggagaggcacaggtggttgagctgaagccgggagggaaggacatccctgtgtccacggcc
aacaggatagcatacatccatttagtggctgattaccgactcaacaaacagatcaggccc
cactgcctggccttcagacagggcctggccaacgtggtaaacctggagtggctgcgcatg
tttgaccagcaggagatccaggttttgatatctggagctcatgtgcccatttgccttgac
gacctgaagacgtttacaaactactcaggtggttacactgccacccaccctgtcattacc
atcttctgggaggtggtagagagcttcaccgatgaagagaaacgcaagctgctcaagttt
gtcaccagttgctcgcggcctcctctcctgggcttcaaggaactgtacccagctttctgc
atccataacggggggaatgacctagagcgcctgcccacagcttccacctgcatgaacctg
cttaagctgcccgagttctgcgaccagcacctgatgaggaacaagcttctgtacgccatt
gagtcctccgcaggcttcgagctcagctga
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