Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420466
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Entry
139420466 CDS
T10872
Name
(RefSeq) myomesin-1-like isoform X1
KO
K24495
myomesin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139420466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139420466
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139420466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_3
Ig_CD22
Adeno_E3_CR1
HmuY
Motif
Other DBs
NCBI-GeneID:
139420466
NCBI-ProteinID:
XP_071026748
LinkDB
All DBs
Position
11:complement(35442319..35485495)
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AA seq
1463 aa
AA seq
DB search
MSGSIPFYQKQHRHYDRGYRSKEVESAVSQYQSSSSSYATRSRASASLSASRGLSASYSG
LEESRLSPIPKRAKPTYLAMDKENQIIGYVVPIFRGSQEYASGLSDTEEARMKESAGYMA
RRNLFTSGLEMERTEQTSRKVSVRQSAEHISLSKRIYENEEYHKCMNEDSLMHAPEFVIK
PRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVTIDPMARPGKYKLQSSYNVHSLEIDRC
DFDDTAQYRVSAMNSRGELSTFASVVVKRFKGEVEEALPMPRHGIVSEYGITFETHIVDG
FGVSFGREGETMSLGAMVIISPNLARYQPEVQWYRDDVLLQPSKWCQMHWSGDKATLTLT
HLNKEDEGLYTLRITTKTKYETYSAYVFVRDADAEVEGAPGAPLDVTCQDASKDYVIVTW
KQPAVDGGNSILGYFVDRCEVGTTHWSQCNDTPIKFARFPVTGLVEGRSYTFRVRAVNKS
GMSRPSRTSEVVAAMDPADRTRMRGSSAPWTGQIIVTEEEPAEGVVPGRPKELEVTEATK
NYVVLSWKAPGERGHEGIMYYVEKCVSGTDSWQRVNTEIPVKSPRYALFDLAEGKAYRFR
VRCCNSAGVGEPSEATEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASRNAKELVGY
YIEASIVGSNTFEPCNNKPVKATRFVCHGLVTGESYVFRVKALNAAGLSECSQESEAIKV
KAAIASPTPPYGISVLECVRDSMVLAWKQPTFIGGADITGYFVDYREVINGVPGKWHEAN
VKAVSDRAYRVSDLKENRKYQFQVRAANMAGVGIPSLPSETFICEEWTIAVPGPPHDLQV
TEVRANTLVLLFKPPVYQGRDPVNGFYVDIKEADAEEEAWRGVNEKAISTNYMKIKIQKE
GETYVFRVRAQNKAGVGKASEPTEPVLAETKPGTTEIVVEIDDDGVISMNFACSNLTPDS
KFVWSKNYKEITDETRITVATSGEKSKAIFNMPAEDDIGIYSCAVTHTNGESSSYTLSAE
ELKKLLEISHDHKFPIIPLKTELAVELQEKGRVRFWLQAEKISANGKIEYVFNDNTLSQG
DKYKMNFNKDTGVIEMIMESLLQEDEGTFTFQLQDGKATNQSSLVLIGEVFKGLQKESEF
MCKEWHRKQGPHFVEYLSYEVTPECCVFLKCKVGNIKKETVALWYKDGREVKGDGNLTFT
EGVLNLEIAQISKKDAGVYEIVMKDDRGKDTSTLNLTEQGFRDLMNEMFSHIANSSTALK
IQSTEEGIRLYSFVSYYNEALQVTWHHKDSAIAFTDRIKSGVVGEQLWLQIIEPTEKDKG
KYAIEFHDGKGGLKRTVELAGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTIQEL
KALNLTCNISGDPVPEVVWLKNEREIVSDDHYIMKFQSGKYASFTITTVNTTDSGKYSIL
VKNKYGTESADFTISVFSPDSKK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatccatacctttttaccagaaacagcaccgccactatgaccgtggctaccgc
agcaaggaggtggagtcggctgttagccagtaccagtcgagcagcagcagctatgccacc
cgcagcagagccagtgccagtctcagtgccagcaggggacttagtgcatcgtactctggg
ctggaggagagcagactgagcccaatccccaagagagccaagcccacctacctggctatg
gacaaagagaaccagatcatcggctatgtagttcccatcttcaggggcagtcaggagtat
gccagtgggctttcagatacggaggaggcccggatgaaggagagtgctggatacatggcc
cggaggaatctgttcaccagtgggttagagatggagaggacggagcagacgtctaggaag
gtgtccgtgcgccaatcagccgagcacatctccctgagcaagcggatctatgagaacgag
gagtaccacaagtgtatgaatgaggatagcctgatgcatgccccggagtttgtgattaag
cctcgctcccacacggtgtgggagaagcagtgtgtcaggctgcactgcaccgtctctgga
tggcctgacccacgcgttgtctggtacaaaaacaatgtgacaatcgatccaatggcccgc
cccggcaagtataagctacaaagcagctacaacgtgcattcactggagatcgacagatgt
gattttgatgatactgcacagtatcgtgtttctgccatgaacagcaggggagaactctct
acctttgcctctgtcgttgttaagagattcaaaggagaggtagaggaggctctccccatg
cccagacatggcatcgtctctgagtacggcatcaccttcgagacccacatcgtggacggg
tttggcgtgtcattcggacgggagggcgagaccatgagcctgggtgccatggtcatcatt
tcccccaacctggcacgttaccagcccgaggtgcagtggtacagagacgatgttcttctg
cagccctccaagtggtgtcagatgcactggagtggagacaaggccacgctgaccctgacg
cacctgaacaaggaggacgaggggctctacaccctgcgcattaccaccaagactaaatat
gagacatattctgcttacgtctttgtcagagatgccgacgcggaggtggagggagcccct
ggtgccccactggatgtgacgtgtcaggacgccagtaaggattacgtcatcgtgacctgg
aagcagccggctgtggacggtggcaactccatcctgggctactttgtggacaggtgtgag
gttggtaccacacactggagccagtgtaatgacacccccattaagtttgctcgtttcccc
gtgacggggttggtggaggggcgctcctacaccttccgtgtgcgtgccgtcaacaagtct
ggcatgagtcggccatcccgcacctctgaggtggtggcagctatggatcctgccgaccgc
acgcgtatgagagggtcctctgcaccctggaccggccagatcattgtcactgaggaggag
cctgcagagggtgtagtccctggcagacccaaagaactggaggtcactgaggccaccaag
aactatgtggttctgagctggaaagcccctggagagcgaggccacgagggcatcatgtac
tatgtggagaagtgtgtgtctggtacagacagctggcagagggtgaacacagagatcccg
gtgaagtctcctcgctacgccctgtttgacctggctgaagggaaggcctacagattccgt
gtgcgctgctgcaactccgctggtgtgggcgagccttcagaggccaccgaggccaccact
gtcggggacaagctggatatcccatctgccccaggacgtgtagttcccaccaggaacact
gacacgtccgtggtggtgtcctgggaggcttccaggaatgcaaaggagctggtgggatac
tacatcgaggccagcatcgtgggcagcaacacgtttgaaccctgcaacaacaagcctgtc
aaagccaccaggtttgtctgccacggtctggtgacaggagagagctacgtgttcagagtg
aaggcactgaacgccgctgggctcagcgagtgttctcaggagtctgaggctatcaaggtg
aaggctgctattgcgtcccctactccaccctatggcatcagcgttctggagtgcgtgcgg
gactctatggtgttggcctggaagcagcccaccttcatcggaggtgctgacatcaccggc
tacttcgtggactaccgtgaggtcatcaatggggtgccagggaagtggcacgaggccaat
gtcaaagctgttagcgaccgagcctaccgagtgtccgacttgaaggagaacaggaagtac
cagttccaagtgcgcgctgccaacatggcaggtgtgggcatcccgtctctgcccagtgag
acgtttatctgtgaggagtggaccattgctgtgccaggacctccccatgatctgcaggtg
acagaggtgcgcgccaacactctggtgttgctctttaagccaccagtgtaccagggccgt
gacccagtcaacggattctacgttgacattaaggaggctgatgctgaggaggaggcctgg
agaggagtcaatgagaaggctatctccaccaactacatgaagattaagattcaaaaggag
ggggagacctatgtgttccgtgtgcgtgctcagaataaggcaggtgtcggaaaggcctct
gagcccacagaaccagtcctggctgaaaccaaaccaggcactacggagattgttgtggaa
attgatgatgatggagtgatctccatgaactttgcctgctcaaacctgactccagactcc
aaatttgtgtggtccaagaactacaaagagatcactgacgaaacccgcattactgtggca
accagtggggagaagtccaaggccatctttaacatgcctgctgaggatgacatcggcatt
tactcttgtgctgtcacccacaccaatggcgaatcctccagctacaccctctcagcggag
gagttgaaaaaactgctggagatcagccacgaccacaaattccccattattcccttgaag
accgagctggctgtggagctgcaggagaagggcagagttcgcttctggctgcaggctgag
aagatctctgctaatggcaaaatagaatatgtgtttaacgacaacactctctcccaggga
gacaaatacaagatgaactttaacaaggacacaggtgtgattgagatgatcatggagtct
ctgctccaagaggacgagggaaccttcaccttccagctgcaggacggaaaagccaccaac
cagtccagcctggtgctgattggagaagtgttcaaagggctgcagaaggagtctgagttc
atgtgcaaagagtggcacagaaagcaaggccctcattttgttgagtacttgagttatgaa
gtgaccccagaatgctgtgttttcctgaagtgcaaggttggaaacataaagaaggagact
gttgcattgtggtacaaggatgggcgtgaggtcaagggagatgggaatctcaccttcaca
gagggagtgctcaacctggagattgctcagatctcaaagaaggatgccggtgtctatgag
attgttatgaaggatgacagagggaaggacacttctacgttgaatctgacagaacaaggt
ttcagagacttgatgaatgaaatgttcagtcatatcgccaactcctccaccgcactgaag
atccagagcacagaggagggcatcagattgtactcctttgtcagctactacaacgaagcg
ctccaggtcacctggcaccacaaggattcagcgatagccttcacagaccgcattaagagt
ggtgtggtaggagagcagctgtggctacagatcatagaacccacagagaaagacaagggc
aaatatgccattgagttccacgatgggaagggcggtctgaagaggactgtggagttggcc
ggccaggcatttgatgacgcatatgctgagttccagaggctcaaagcggccgcaattgca
gagagaaatcgtgctcgtgtggcgggaggcctgcctgatgttgtcaccatacaggagctc
aaggccctgaacctgacctgtaacatttcaggcgaccccgtgcctgaggtcgtctggctg
aagaacgagagggagatagtgtcggacgaccactacatcatgaagttccagtcggggaag
tacgccagcttcaccatcaccacggtgaacacgacagactcgggcaagtacagcatcctg
gtgaagaacaagtacggcacagagagcgcagacttcaccataagtgtcttcagccccgac
agcaagaaataa
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integrated database retrieval system
