Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420475
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Entry
139420475 CDS
T10872
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139420475
04121 Ubiquitin system [BR:
ocla04121
]
139420475
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139420475
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
139420475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
CTD
Motif
Other DBs
NCBI-GeneID:
139420475
NCBI-ProteinID:
XP_071026760
LinkDB
All DBs
Position
11:36430230..36460392
Genome browser
AA seq
1122 aa
AA seq
DB search
MAECSVTDSLDFNHDGPSSRQKQNQHQSRRGRARVDHNRTWSSPNNYVPLPQQQQDHFHH
GVKSSHDNVLVNFHPPPHHREDVQRGRGRGSNGSCGGGGRGSRGRNPRWNRPGVEIGTGA
LGLPGGHHGLVGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPAHEDHQDTRPKKPR
RFSQEPRRGERSSKGPPHSLDKQENQENHATGGGGGGWDLVEPREETRSLEIGTRNRKGG
RTEERNPHVDPRKKFQEPKRSQGPIKEYPQERKEPERGASGRDILPAHHGKLGPSTEEEP
NWRGQGKCTPLQDRGQRRTPKYDYRPGQKRGDNNMPNKSKETQTGCLIEQLSEEKYECMV
CCEVIRVMAPVWSCLSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNTY
KCFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTKACIC
GRTSQPMRCGQATAIHCDKQCDLILNCTEHTCTQACHSGLCQPCQLQVQQVCFCGVVYRE
VLCGTDKDCFDGSGHFSCQKACGKILDCEAHRCKQVCHRGPCQPCPRSPRLVRNCPCGQT
ALAKLLELGYPERRSCSDPIPSCGKTCNKPLPCGSNETIHICEKLCHEGCCGPCTLTSTI
KCRCGSKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGVEHTCSLVCGYK
LNCGLHRCQELCHRGNCQPCWQTSFDELACHCGGTVLFPPIACGTKPLECKNLCTRRHKC
DHQVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLTCNKVLLCDLHRCR
RICHRGECLAKGACRQPCVLPRADCGHPCNAPCHKGTSCPRNTCAAKVALQCDCGRRKET
VVCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQAKLECDEGCAALERNRR
LAVALQSYPSVDPFNIRTSSSTYSDSLRGDARKDLKFVSEVEEEIKNLVELASKGKLSKR
SHCFPPMNREHRKIVHELAEVYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLIERD
TGVSRAPPPIAHIKQHSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcacagactctctggattttaatcatgatgggccttcatcacga
cagaaacaaaaccaacaccagtccaggaggggtcgagccagagtggaccacaaccgtact
tggagtagtcctaataattatgtcccactgccgcagcagcagcaagaccattttcaccat
ggggtcaaatcatctcatgacaatgtcctagtaaacttccatcctccacctcaccacaga
gaggatgtacagaggggtcgaggaagagggagtaatggaagttgtgggggaggtggccgg
ggctcaaggggccggaatccgaggtggaataggcctggggttgaaattggcactggggcc
cttggcttacctgggggccaccatggactggttggtggaggctacaggcctggaacactc
cacatggagaggggaccccccattgacgggcctagctggcgtcgagaccctgggggccgg
gggggagaggtggggcctgcccatgaagaccaccaggacacccggcctaaaaagccccgg
aggttcagccaggagccacggagaggagagaggagctctaaaggacctcctcactctctg
gacaagcaggagaaccaggaaaaccatgctacaggaggagggggaggaggctgggatctg
gttgagcccagagaagaaacccgatcattagaaattggaaccagaaaccgtaaaggcggt
aggaccgaggaaaggaacccccatgttgaccctcgaaagaaattccaagagccaaagcga
agccaggggccgatcaaagaatatccccaggagaggaaggagcctgaaaggggagccagc
ggcagagacatcctccctgcccatcatggcaaactgggccccagcactgaagaagagccc
aactggaggggtcaggggaaatgcacccccctgcaggacagaggccagaggagaacaccc
aaatatgactacaggcctgggcagaagaggggggacaacaacatgcccaacaagagcaag
gagacacagacaggttgcctgattgagcagctgtccgaggagaagtatgagtgcatggtg
tgctgtgaggtgatcagggtgatggcacctgtctggagctgtctcagctgcttccatgtc
ttccatctcaactgcatcaagaagtgggcccgctccccagcctcacaggcagatgaaaca
aatgatgggtggaggtgtccagcttgtcagaatgttgtcttccaacccccaaacacctac
aagtgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatcccacacagc
tgtggagatatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaacatc
ttgtgtcaccccggaccttgtccacagtgtcctgcctctgtcaccaaagcctgcatctgt
ggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcag
tgtgacttgatcctcaactgtaccgaacacacctgcacccaggcgtgccacagcggactg
tgccagccgtgccaactacaggtccagcaggtgtgcttctgtggcgttgtctatcgggag
gtgctgtgtgggacggataaagactgctttgacggctcaggacacttctcctgtcagaaa
gcatgtggcaagattttggactgtgaggcccaccgatgcaagcaagtgtgccaccgtggg
ccgtgccagccgtgcccacgctcccccaggctggtgaggaattgcccctgtgggcagacg
gccttggccaagctcctggagctgggctaccctgagcgccgcagctgctctgaccccatc
ccttcctgtggcaagacctgcaacaagcccctgccctgtggatccaatgagaccatccac
atctgtgagaagctgtgccacgagggctgctgtggcccctgcacactcacctccaccatc
aaatgcagatgtggttcgaagatcaatgatgttccctgtgcaaccatccagaatgaagat
ggactgatttttacctgtgagaagcgctgcctaaagaagcgctcctgtggccgacacaaa
tgtggcgagctgtgctgtgtgggtgtggaacacacatgctctctggtctgtggctacaag
ctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgc
tggcaaaccagttttgatgagctggcgtgccactgtggggggactgtcctgttcccccca
atcgcctgtggcaccaagcccttagagtgtaagaacctgtgtaccaggaggcacaagtgt
gaccaccaagtgttccataattgccacagtgaggagaagtgcccaccctgtacttacctt
actcagaagtggtgcatgggaaagcatgagcgaaggagcaacattccgtgccacctgcag
gacatctcctgtggtctgacctgcaacaaggtgctgctgtgtgacctccaccgctgccgc
cgcatctgccaccggggagaatgtctggccaagggcgcctgccgccagccctgtgtgctg
ccccgtgccgactgtggccacccctgcaacgccccttgccacaagggcaccagttgcccg
cgcaacacctgcgctgccaaggtggcgctacagtgtgactgcggccggagaaaggaaacg
gtagtgtgcacggaggcagccagtgcccatcagaggtatgctgccattgccatggccagt
aagctgtctgacatgcagctgggtgactctgtagacatcggtctaatcactaagaaggag
atgaaacaggccaagttggagtgtgacgaagggtgtgctgcactggaaaggaacaggcga
ttggctgtggccctgcagagttacccttcagtggaccccttcaacatccgcacctcctcc
tccacttatagtgacagcctccgaggagatgccagaaaagatttgaagtttgtcagcgag
gttgaagaggagatcaagaatctggttgagttggccagcaagggtaaactgtccaagagg
agccactgcttccccccaatgaacagagagcacaggaagatagtccacgagctggctgag
gtctacaacgtagagagcgtgagctacgacagcgagcccaaacgcaacgtggttatcacc
gccatcagggggaagtctgcctgtcctaactcaacactgacgtccctgatagagagagat
acaggggtctcaagggctcccccacccattgcccatatcaaacaacatagcaagactgat
ggcgtgagcagctggtccaaggcagtcaaagaagagccggcaatcgactacttcgatgtc
caggattaa
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