Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420482
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Entry
139420482 CDS
T10872
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
Spliceosome [BR:
ocla03041
]
Complex A
U2 snRNP components
U2 related factors
139420482
Complex B
139420482
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NCBI-GeneID:
139420482
NCBI-ProteinID:
XP_071026779
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Position
11:36792816..36818428
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AA seq
561 aa
AA seq
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MAVTEIAGGTALMMENGQGTGAKLGLPPLTPEQQEALQRAKKYAMEQSIKSALVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQ
AQPIIDQLAEEARAYNRIYVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGRHKSFG
FVEYDKPQSSLDAVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTQPGGLPPAAAVAAAAAT
AKITAQASMIPFQRDLLAFQEAVTGASILGAMAGANQMGQMGSMGQMGSMGQMGSMGQMG
IPQAVMAAQAPGMITGVTPVRPNLPVLPQVGLVNPVLASPPVITNPAQPNPSLQELQKKK
QEEKEMLQDGTGQEMLSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDD
LEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASEMNKAIQALNDRWFG
GRKVIAEVYDQERFNSSDLSA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggagattgcgggagggacagctctgatgatggagaatggacagggcaca
ggcgcgaagcttggcctgccgcctctcaccccagagcagcaggaggcactccaaagggca
aagaagtatgcgatggagcagagcattaagagtgccttagtgaagcagaccattgctcat
cagcaacaacagcttaccaacttacagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcggctcagcggcagcgtgctctagccatcatgtgccgg
gtgtatgtgggctccatatactatgagctcggggaggacaccatcagacaggcctttgcc
cccttcggccccatcaagagcattgacatgtcatgggactcagttacaatgaagcacaag
ggctttgcctttgtggagtatgagatcccggaggctgcacagctggctctggagcagatg
aactcggtcatgctcgggggcaggaacatcaaggtggggcggccaggtaacattggtcag
gcgcaacccatcatcgaccagctggcagaggaggcacgcgcctacaaccggatctacgtt
gcctccgtccaccccgacctctcagacgaggacatcaagagcgtctttgaggccttcggg
aggatcaagtcctgcacgttagccagggaccccaccacaggaagacacaagagctttggc
ttcgtcgagtatgacaagccccagtcgtccctggacgcagtgtcctccatgaacctgttt
gacctggggggccagtacctgcgggtgggcaaggctgtgacccctcccatgcccatgttg
acccccacccagcctggtggcctgccccccgctgcagccgtggctgctgcagcagccacc
gctaagataacggcccaggcaagtatgattcccttccaaagggatctattggccttccag
gaggctgtgaccggggcgtccatcttgggggcgatggctggggcaaaccagatgggccaa
atgggttcgatgggacaaatgggctcgatgggacaaatgggttcgatgggacaaatgggc
atccctcaggcagtcatggctgcccaggcccccggaatgatcacaggtgtgacaccagtg
cgtccaaacctgccagtgctgccccaggtgggcctggtcaaccctgtgctggcctcgccg
cctgtgatcaccaacccagcccagcccaacccctctctgcaagaactgcagaagaagaag
caggaggagaaggagatgctgcaggacgggacaggccaggagatgttgagcgaccaagaa
cacatgagtatctcaggcagcagcgccagacacatggtcatgcagaaactgctgaggaaa
tcagaatctacggtgatggtgttacggaacatggtggggccagaggacatcgatgacgac
ctggagggtgaggtaactgaggagtgtggcaagtttggtgccgtcaaccgagtcatcatc
taccaggagaagcagggcgaggaggaagatgccgagatcatcgtcaagatctttgtggag
ttctccatggcctcggagatgaacaaggccatccaggcactcaacgaccgctggttcggg
ggtcgcaaggtcatcgcagaggtctacgaccaagagcgattcaacagcagcgacctctcc
gcataa
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