Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420483
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Entry
139420483 CDS
T10872
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139420483
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
139420483
NCBI-ProteinID:
XP_071026782
LinkDB
All DBs
Position
11:36841767..36969990
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AA seq
2007 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLSHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGDCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDESTGEKVLTVYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISCPDGEPESPGTEEKRLSNLSNQSHDSAASNSTASANSHEERRC
VITTARESLVGGRGEKEEEELDEMEVEYVEPTVHFAEEPIYQGGNEDGEDEEGGDGVPCS
DLEEQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPTSHH
PDPEKEEEEEEECMVTPQRHNRIEEPKQEERSLLHVNSSLQPVKGVSFDQVNNLLIEPAR
IEEEEYTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGDKLL
EVNGVVLQGAEHHTAVEALRSSGAAVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRA
SGLPFCIEAGSPAGFRHRLSACLVRNDKGLGFSIAGGKGSTAYRTGDMGIYISRIAEGGA
AHRDCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTPGCSPGL
SRARAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLEDEYPIEEVALVKAGGPLGLS
IVGGSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVKA
LLSNKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFIS
KVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDPGNA
AAVEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEM
EKVERMRLEREEDTRLLEEETENLGTGSLKLDYRTLAALPTTALQKVNRLSPSVSATAPI
QAQCSFTVEPLDFDLGQPPTSLFPLPHALPQSGPIMNTEAGPLYMSQHSPSPLITASNQG
AARQEALPTGEDEEVVVLVDSQPINFTENPFLVANRRGKGCPPSERILSGPPVGYGSAGK
LQPWLFSKAPSTEPPRTDSPIRDAPYSPTTQPASIHFTPTALPAKEEISPLSPYETRPGA
IQPLSRGGGRPITSPATPDGHSSPNPFQHGLSPINSQTFLQPRAPSPDTIDEFPLNPKQA
YKAFAAVPHWLAVLEPPPQDLFGQRNNVHHNQPSPETPSPGGRDDLAQRSFRDRQKYFEI
DMKQQTPDTKPKGRVSLVGADDLKKMREEEERRFEQRAREYLMDEDDEEEDDLVKQMGVL
KATGKVVLDGVEYKVEPVATPRRHCNTPPSYSATPPSYCGSSGPSSVDGKGDSQRISLEE
SFKLEQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELAPAGDKDLSPSEK
RALEAEKRALWRAARPYGLEEDVRQYEQDLAKRLYQSRVRASQGTAPPPQSQNAAASSAA
SQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPALTPSPTPLEDFSPQGVTSP
GRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDVVDDIQFIDDGSSNPVHAADPGTEVPTAT
SALEMALYSNTRQLRQGCRSLETAVPT
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcagtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ctgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaagcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaacgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcactctctttcctggtgaaactggagcatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacga
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactcgtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctctcacacaacctcctggaggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacttgaatgtggac
cgcaaccggctgggcgacgtgccagatgagctgggtgattgcgccagcctcaacgtgctc
tccctcagagacaatcgtgtggccaaattgcccgctgagctggctgacgccactgagctt
catgttctggatgtggcagggaacaggttacagaacctgccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggaaaaggtgctcaccgtctacctgttgccccagcagccc
tcccctagcctggagaacctgctgcagaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtgtccgttatccagttccaggaggagaccaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcctacatatcctgtcctgat
ggagagccagagtctcctggtactgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcttccaacagcacagcctctgccaactctcacgaggagagacggtgc
gtgattaccacagcaagggagagcctagtgggtgggcgtggtgaaaaggaggaggaggag
ctagacgagatggaggtggagtatgtggagcccacggtgcactttgcagaggagcccata
taccagggtggaaatgaggacggtgaggacgaggagggtggggacggggtcccatgcagc
gacctagaggaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggac
acgccgcactacaagaagcacttcaagatcaccaagctgccaaaacccgaggcggtggcc
gcgttactgcagggcttcagccccgacgcacacctggcccaacaccccacctcgcaccac
cctgaccccgagaaggaggaagaggaagaggaggagtgtatggttactccacagcgccac
aacagaatagaagagccaaagcaggaggagaggagtctgcttcatgtcaactcttccctg
cagccggtcaagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcga
attgaggaggaagagtacaccctgaccattctacgtcaaactgggggcctgggcatcagc
atagccggaggacagggatccacaccctacaagggggatgatgagggaattttcatctcc
agggtgtctgaagagggccctgcagcgcaggctggggtcaaagtgggagacaaactccta
gaggtgaacggtgtggttctccagggggcagagcaccacacagcggtagaggccctgcgc
agctcgggcgccgccgtctccatgagcgtcctccgggagcacatggtggagccggagaac
gccatcaccaccacaccgctaaggcccgaggacgactacttcccccgggagagacgggcc
agtggccttcccttctgcattgaggcaggctcccccgcaggcttccgacacaggctgtct
gcctgcctggtccgcaatgacaaaggtctcggcttcagcattgccgggggcaaaggctcc
acagcctaccgcacgggggacatggggatctacatctcgcggatcgcagagggaggggcg
gcccacagagactgcacactccgagtaggggacagggtcatcaccatcaatggcgtagac
atgaccgaggccaggcacgaccaggcagtagcgctgcttaccggcacctctcccaccatt
gctctcctggtggagcgtgaccaggccgagccgggcaccccagggtgctccccgggcctg
tcccgtgcccgcgcccactcccccccacctccagagccctctgactcacccgaccaggaa
gagggcaacgacgactccagcctcttgccccacgggaaccacctgagccagccgctggag
gacgaataccccatcgaggaagtggcgttggtgaaagcgggcggccccctgggactgagc
atcgtgggaggcagtgatcacgccagtcacccgttcggcatcaacgagcctggcgtcttc
atctctaaggtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacagg
atactggaggtgaacaccatcgacctgcgccacgccacccaccaggaggctgttaaagcc
ctgctctccaacaagcaggagatccgcatgctggtgcgcagggacccctcgcctcccggg
atggaggagatagtgatccagaagcagcctggagaaaagctgggcatcagcatccgcggc
ggtgccaagggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatcc
aaggtgagctccagcggtgcggcggccagggatggccgtctgcttgtgggcatgcggatc
ttggaggtgagtaaccacagcctgctgggcatgacccacacggaggctgtacgcgtgctc
cgcgccgtgggagacaccctggtcatgctggtgtgtgacggcttcgaccctggcaacgct
gccgctgtagaggcgtcaccgggcatcattgccaacccgtttgccgcaggcatcgtgcgt
aagaacagcatggagagcatctcctctatagaccgagacctgagtcccgaggagatggac
atcctacagaaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatg
gagaaggtggagcgcatgcgcttggagcgtgaggaagatactcgcctgctagaagaggag
accgagaacctgggcactgggtctctgaaactggactaccggacgctggccgcactgccc
accaccgctctccagaaggtcaacaggttatctccttctgtcagtgcaactgcccccatt
caggcccaatgttctttcaccgtagagcccctggattttgacctggggcagccccccacc
tccctcttccctcttccccatgctctacctcagtccggccccattatgaacacagaggca
gggcccctctacatgtcccagcactctcccagtcccttgataaccgcctccaatcaagga
gcagctagacaagaagccctgcctactggtgaagatgaggaggtggtggttctggtggac
tcccagccaatcaacttcactgagaaccccttcctggtggccaatcgcaggggcaagggg
tgccccccctctgagcgcatcctctcagggcctcctgtgggctacgggagtgcgggcaaa
ctgcagccctggttattcagcaaggcgccctccactgagccccccaggacagacagtccc
attagagacgccccctactcaccaaccacacaaccggcaagcattcatttcacccctact
gcactgcctgccaaggaggaaatctcaccactgagtccctatgagacaaggccaggtgcc
atccagcccctctcccgtggtggcgggcggccgatcacctctccagccactccggacggg
cacagcagccccaatcccttccagcatggcctctcccccatcaactctcagacctttctg
cagcctcgtgccccctcccccgacacgatagatgagttccccctgaaccccaagcaggca
tacaaggcattcgccgccgtgcctcactggctggccgtgctggagcctcccccgcaggat
ctgtttggccagaggaacaacgtccaccacaatcagccttctccagagactccatcacct
ggtggcagagacgacctggcgcagcgctccttcagggacagacagaagtactttgagatc
gacatgaagcagcagacgcccgacaccaagcccaaaggccgcgtgtccctggttggagca
gacgacctgaagaagatgagggaggaggaagagaggagattcgagcagcgggcacgtgag
tacctgatggatgaagatgacgaggaggaggatgacctggtgaagcagatgggagtgttg
aaggccacgggcaaagtggtgctggacggggtggagtacaaggtggagcctgtagccacc
ccccgcaggcactgtaacacgccccccagctacagcgccacaccccctagctactgtggc
agctcagggccctcgtcagtggatggtaaaggagactcccagaggatttccttagaggag
agcttcaagctggagcagcagaggcccaactccatgactggtctgatcccagtgtaccct
ggagagtcgggggctcccatccggacagccaaggcagaacggaggcaacaggagcggctg
aggatgcagagtccagagctggccccagctggagacaaggacctctccccctccgagaaa
cgggctctggaagccgagaagagagctttgtggagggcagcaaggccctatggcctagag
gaggatgttaggcagtatgagcaggacctggctaagaggctctaccagtcgcgagtgagg
gcgtctcagggcaccgcgccaccccctcagtcccaaaacgccgccgcctcttccgctgcc
tcccagctcaggatgaagtctctggagcaggatgctttgaaggctcagatggtcatcgct
aagtccagggagggaaagaagcgtggcacactggaccagctggccgagtcgccctcgccc
gccctcacgccatcccccacccctctggaagatttcagtccacaaggagtaacgtcacca
ggcagactgtccctgtcggaaaagaagtttgactaccgacagtttgctgccattccttct
tccaaacccgtatacgacatccagtcccctgacgtggtcgatgacattcagttcattgac
gatggctccagtaacccagtgcatgctgcggatcccgggactgaggttcccactgccacc
tcagcactggagatggccctctacagcaacacgcgccagctgaggcagggctgccgcagc
ctggagaccgccgtgcccacataa
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