Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420550
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Entry
139420550 CDS
T10872
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocla04054
]
139420550
Pattern recognition receptors [BR:
ocla04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
139420550
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GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_6
LRRNT
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
139420550
NCBI-ProteinID:
XP_071026846
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Position
11:complement(18817317..18822289)
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AA seq
805 aa
AA seq
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MELKITLSGKGNGSTYSRLSFFLCILLYFWVLFNPVNGYSMKHCRIRESLNTSVLCDGRN
LNAVPADIPLLVRSVNIAKNNISQIKREDFKDLTILKMLIMYSNRISHVENGSFSDLVAL
EQLNLAFNKLTSLSDQMFKGLDNLTVLQLENNHISSIASSSFQLLFSLKVLNLTSNKLHC
FKELKHILQLPSLLKLFIGNNSLNSLQSQEISNRSIGLTELDLSRNPLEIFSVTADIFPY
LKKLDLSFCGINGSMEWDVADRYFLSNVSSLDLSGIHMSLQGIGSVLQSINFSLASLGLD
KIGKYNLINVACHIPTLKTLRLQCNNFSSVSDKLLQSCTQVTDLDISGNNITDLSEAAFR
SIKNLKTLRLGYDGLSSVPNATRNLRTLKKLDLSHNIIKTLGCSDFSNLRRLEKLYLNNN
LISKLEGCVFLDLRALNSLTLRRNRILNLGDAFTKGLQHLKSLDLGFNKLTNIRTNDFKS
LRSLEDLSLYDNEIKTLEDGAFVGLAKLKNLVLLNNVIGKSEIRGAVFKGLRSLKTLNMA
SNAIKYEKDEQLQQPPFTDLSSLENLYIFSQHYNDLKDTKLLDLDTHSCSVDLGIFYFIS
TTSLVLLTLLGSFIYHLLRWQVVYAYYLFLAYLHDSKRRNRQTPHQYDAFVSYNTHDECW
VVRELLPELEGVQGWKLCLHHRDFQPGKPIIENITDAIYRSRKTICVITHRYLQSEWCSR
EIQVASFRLFDEQKDVLILVFLEEIPDHQLSPYHRMRRLVKRRTYLSWPRAGEDTRVFWQ
KLQVALETRDWPAEENPILTGVERQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaataaccttgtcaggaaaaggaaatgggtctacatattctcggttgagt
ttctttctatgcattcttctgtatttctgggttctatttaatccagtaaatggctactca
atgaaacactgcagaatcagggaatctctaaacacgtctgtgctatgtgatggcaggaac
ctcaatgccgtaccagcagacatcccattattggtgagatctgtaaacatagcaaagaat
aacatttcacagataaaaagggaggacttcaaagatctaacaatcctcaaaatgttaatc
atgtacagcaacaggatttctcatgttgagaatgggtctttttcagacctggtggctcta
gagcagctgaatctggcctttaacaaactcacatccctctcagaccaaatgtttaagggc
ctggacaacctcacagtactacaattggagaacaaccacatctcaagtattgcctcctca
tcttttcagttactcttcagcttgaaggtactgaacttaaccagcaacaaactacattgt
ttcaaggagctgaagcacattttacaattgccaagcttgctgaagttgttcattgggaac
aacagcttgaactctttgcagtcacaggaaatatcaaataggtcaatagggctgacagag
ctggatctatccaggaatcctctggagatcttcagtgtcacagcagatatttttccctat
cttaagaaactagacctctccttctgtggcattaatggaagcatggaatgggatgtagcg
gacaggtattttctgagtaatgtgagcagcctcgacttgagtggcattcacatgtcttta
caggggattggttcggtgctccagagcatcaacttttcgttggcatctctggggctggat
aaaataggaaaatataacctcattaatgtagcctgccacatacctacactgaaaaccctc
cgattgcaatgtaacaacttcagcagtgtctctgacaagctgctgcagtcctgcacacag
gtgactgacctggacatatcaggtaataatattactgacctgtcagaagctgcttttcga
tcaataaaaaatcttaaaactctgagactaggctatgatggcctctcttctgtgccgaat
gctacaaggaatctccgcacattaaaaaaattggatctcagccacaacatcatcaaaact
ttaggctgctcggatttctccaatctaagaagacttgaaaaactctatcttaacaacaat
ttaatctcaaaacttgaagggtgtgttttcctggatttaagggccttaaatagcctgaca
cttagaaggaacagaatcctaaacctgggtgacgctttcacaaagggtttgcaacattta
aagagcttggatttaggattcaataaactaaccaacatcagaacaaatgacttcaaaagc
ttaagatcacttgaggatttgtctttatatgacaatgaaataaagacactggaagatggg
gcctttgtgggtttggccaaacttaaaaatcttgtcctgctaaacaatgttataggtaaa
agtgaaatccggggtgctgtgttcaaaggacttagaagcttaaaaactctcaatatggct
tccaatgctatcaaatatgaaaaagatgaacaactacaacaaccacccttcactgacctg
tcatctctggaaaacctctacatatttagtcagcattataatgatctcaaggacactaaa
ctgttggacctggacacccactcctgttcagtggacctaggcatcttctacttcatctca
accacttctctggtcctcctcaccctgctggggtcctttatctatcatctcctgaggtgg
caggtggtatatgcctactacctcttcctggcttatctccatgactccaagcggaggaac
agacaaactcctcatcagtacgatgccttcgtttcctacaacacccatgatgaatgctgg
gtcgtgagggagctgctgccagagttggagggagtgcagggctggaagttgtgtcttcac
caccgggacttccagccaggtaaacccatcatagagaacatcacagacgccatctacagg
agcaggaaaaccatctgtgtgatcacccaccgatatctgcagagcgagtggtgctccaga
gagatccaggtggccagcttccgtctttttgatgagcagaaggatgtgctgatcctggtg
tttctcgaagagatcccagaccaccagctctcaccctaccaccgcatgagaaggctggtg
aagagacgcacctacctgagctggccaagagctggggaggacacaagggtcttctggcag
aaactccaggtggctttggagaccagggactggcctgctgaggagaaccccatcctcacc
ggggtggagaggcagtga
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