KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420605
Entry
139420605         CDS       T10872                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03030  DNA replication
ocla03410  Base excision repair
ocla03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139420605
   03410 Base excision repair
    139420605
   03450 Non-homologous end-joining
    139420605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocla03032]
    139420605
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139420605
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139420605
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139420605
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     139420605
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     139420605
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139420605
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 139420605
NCBI-ProteinID: XP_071026900
LinkDB
Position
11:complement(9192249..9197443)
AA seq 380 aa
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PNEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATSGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaa
caagacatcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgtcagacaggatggtaatgtgctacaaaacgaggatggagagacc
acaagccatctcatgggcatgttttaccggactatccgcatgctggagcacggcatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcccaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgacgaa
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggctgag
gcgagctgcgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttcctgttcagtcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgacccgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctaacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcactatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaacctcaggcaaatttaagaagggcaaa
tag

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