Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420608
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Entry
139420608 CDS
T10872
Name
(RefSeq) DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139420608
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139420608
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Topoisomerases
139420608
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
139420608
NCBI-ProteinID:
XP_071026904
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Position
11:complement(10616243..10628069)
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AA seq
846 aa
AA seq
DB search
MKLEDNEGHGGAETSSRKRTASESKIDESPTDRKRSKDGERDKKEETELKHKTKHSSSKH
PRKPLQEPKITSSGGFKAVSENDHADVKTRSVAMDASLPSEKNTIDLNNNISAKHTESDE
RKVTKTELQEVDLFAPIEHSDMERSDKKSKKTGDSQKDNKHKHKSKSSKKGHHRTDERNP
EQRKVGEISANSSDGNSKKRKSKDSCETDVLPTGDSKKETAVKKENAKKEREKKDRSGKD
TKTSDEKKRKNKPEGKEESKKKKKDGDDGKTKKGGKKEGEDSTWKWWEEGNSNNGNKWTT
LEHKGPLFPPEYEPLPNNVSFFYNGNPVKLTLPAEEVATFYAKMLDHEYTTKSSFQENFF
TDWREEMSVEEREQIKKLSKCDFTHINKYFLDKSEEKKAMTKEQKQVLKEENNKLTEEYG
FCELDGHREKIGNFRVEPPGLFRGRGEHPKMGKLKKRIQPEEITINCSKGSNIPVAPKGH
RWRKVQHDNTVTWLASWVENVQGNFKYVMLNPSSKLKGEKDWQKYEVARKLKLKVETIRR
LYREDWKNREMKTRQRGVALYFIDKLALRAGNEKEESETADTVGCCSLRVEHITLHQEKG
GQEFMVEFDFLGKDSIRYYNEVPVEGRVFKNLKLFMENKEPEDDLFDRINTTYLNKHLNQ
SMPGLTAKVFRTFNASTTLQEQLNKLTTADMSLEEKLLSYNRANRAVAILCNHQRAAPKT
FEKSMQNLQDKIAQKQQQLDVARKELKEAKKEHKRGGTERTRKLVEKKEAVVKRLEEQLK
KLQLQMTDREENKVIALGTSKLNYLDPRISVAWCRKFNVPIEKIYNKTQRDKFAWAIDMT
EEDFQF
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggaagacaatgaagggcatggaggagccgaaacatccagcaggaaaagaaca
gcatcagagtctaagattgatgagagcccaacagacaggaagaggagtaaggatggggaa
agggacaaaaaagaggaaactgagctgaagcacaagacgaagcactccagttctaagcat
cctcgtaaacctctgcaggagccgaagatcacaagttctgggggctttaaagctgtctcg
gagaacgaccatgcagatgtgaagaccagaagtgtagccatggatgcatcactaccttct
gaaaagaacaccattgacttaaacaacaatatctctgccaagcacacggaatcagatgag
aggaaagtgaccaagactgagttacaggaagttgacttgtttgcaccaattgagcattca
gatatggagaggtctgacaaaaaatctaagaaaactggggattcacaaaaagataacaaa
cacaagcacaaatctaaaagtagcaaaaagggacaccacaggacagacgagagaaaccct
gagcagagaaaagttggtgaaatatcagctaacagttccgatggcaactctaaaaagagg
aagagcaaagattcatgtgaaactgatgttctaccgacaggtgacagtaaaaaagaaact
gccgtaaaaaaggagaatgccaagaaagaaagggagaaaaaagatagaagtggtaaagac
acaaagacatccgatgagaagaaacgtaaaaataagccagagggaaaagaggaatctaag
aagaagaaaaaagatggagatgatgggaagaccaagaagggtgggaaaaaagaaggggag
gacagtacatggaaatggtgggaggaaggtaattccaacaacgggaacaaatggaccacg
ttggaacacaaaggtccacttttcccaccagaatacgaaccattaccaaataacgtgtct
ttcttttacaatgggaaccctgtaaaactgactttgcctgctgaggaagtagccacgttt
tacgccaagatgctggaccatgagtacacaaccaagagttccttccaggagaacttcttc
accgactggagagaggaaatgtcagtagaggagagggaacagatcaagaagttgtcgaag
tgtgatttcacacacatcaacaagtacttcctggataagtctgaggagaagaaggctatg
actaaagaacagaaacaggtcctgaaagaggagaacaacaagctgacggaggagtatggc
ttctgtgagctggacggtcaccgggagaagatcgggaacttccgtgtggagccaccgggg
ttgttccgtggccggggagaacaccccaagatgggcaagctgaagaagaggatccagcca
gaggaaatcaccatcaactgcagcaaaggctccaatattccggtggccccaaagggccac
aggtggaggaaggtgcagcatgacaacacagtgacctggctagcctcctgggtggagaac
gtccagggaaacttcaagtacgtcatgctcaaccccagctccaaactcaagggggagaag
gactggcagaagtacgaggtggctcgtaaactcaagcttaaggtggagaccatcaggagg
ctgtaccgtgaggactggaagaaccgagagatgaagaccagacagagaggagtggctctc
tacttcatcgacaagctggccctgcgagcggggaatgagaaggaggagagtgagacagcg
gacacggtgggctgctgttctctgagagtggaacacatcaccctgcaccaggagaagggg
ggccaggagttcatggtggagtttgacttcctgggcaaagactctattcgctattataac
gaggtgcctgtggaaggcagggttttcaagaacctgaagctgttcatggaaaacaaggag
cctgaggatgacctgtttgatagaataaatactacctacctgaacaagcacttgaaccag
tccatgccggggctgacagcaaaagtgttccgaaccttcaacgcctccaccactctgcaa
gaacagctcaacaagctcaccactgctgatatgagtctggaggagaagctgctgtcctat
aaccgagccaacagagctgtggccattctctgtaaccaccagagggcagcacccaagaca
tttgagaaatccatgcaaaacttgcaggacaagattgcgcagaagcagcaacagttagat
gtggccaggaaggagctgaaagaagccaaaaaagagcacaagaggggcggaactgagagg
accaggaagcttgttgagaagaaggaggctgtggtgaagaggctggaggaacagctgaag
aaactccagctgcagatgactgacagggaggagaacaaggtcatcgctctgggcacatcc
aaactcaactacctggaccccaggatatcagtggcctggtgtaggaaattcaatgtgcca
atcgagaagatttacaacaaaacccaaagagacaagtttgcttgggctattgatatgact
gaagaagattttcagttctga
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