Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420613
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Entry
139420613 CDS
T10872
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
KO
K15361
WD repeat-containing protein 48
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03460
Fanconi anemia pathway
Brite
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
139420613
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139420613
NCBI-ProteinID:
XP_071026911
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Position
11:12087965..12102822
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AA seq
686 aa
AA seq
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MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKSECALLKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGT
IRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPELRMLICEE
KAPVLKMELDRSADPPTALWVSTTKSTVNKWSLKGIHNFRASGDYDNDCTTPLTPLCTQP
EQVVKGGASIIQCHILNDKRHILTKDTNNNVAYWDILKACKGEDLGKMEFDEEIKKRFKM
VYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGADPKLNLGGLLLQALLEY
WPRTHVNPMDEETEMNHVNGEHESRIQKGNGYFHVPPHTPVIFGEAGGRTLFRLLCRDSG
GETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVR
KVMEHVYEKIINLDNESQTGASGNNDKPSEQQQQKEEEDVAVLAEEKIELLCQDQVLDPN
MDLRTVKHFIWKSGGDLTLHYRQKST
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcatcacaggcagaatgctgctgggcggagaaaagtgcaggtatcctatgtg
attagggatgaggtggagaagtacaaccgcaatggggtgaacgccctgcagctcgacccg
gccttgaaccgcctcttcacagctggccgagactccatcattaggatatggagcgtcaac
cagcacaagcaggacccgtacattgcatcgatggaacaccacacggactgggtcaatgac
atcgtcctctgttgcaatgggaagacattgatatctgcttcctcagacaccacagtgaaa
gtctggaatgcgcataagggattctgcatgtccacattgcgaacacacaaggactatgtc
aaagccttagcctatgccaaggacaaggagttggtggcctcagcggggctggacagacag
atcttcctatgggacgtcaacacactaacagcactgactgcctccaataacaccgtcacc
acctcctcactgagtgggaacaaagactccatctacagtctggctatgaatcagatgggc
accgtcattgtgtcagggtccactgaaaagagtgaatgtgcccttttaaaggtactgaga
gtttgggatcctagaacctgtgccaaactgatgaagttgaaaggccacactgacaacgtc
aaatcattactgctaaacagggatggtactcagtgtctctcgggcagctcagacgggacc
atccggttgtggtcgctggggcagcagcggtgcatcgccacctaccgggtgcacgatgag
ggcgtatgggccctacaggtcaacgaggccttcacgcatgtctactctggtggccgtgac
cgcaagatctactgcactgacctgaggaacccagagctccgtatgctcatctgtgaggag
aaggcccccgtcctcaagatggagctggaccgctccgctgacccccccacggccctctgg
gtctccaccaccaagtccaccgtcaacaaatggtctctgaagggcattcacaatttccga
gcatctggagattacgacaacgactgcactactcccctgacgcctctctgcacacagccc
gagcaggttgttaaaggcggagccagcattattcagtgccacattctgaatgacaagaga
catatactaaccaaagataccaacaacaacgttgcatactgggatattttaaaggcgtgt
aaaggggaagacctgggtaagatggagtttgacgaagagattaaaaagaggtttaaaatg
gtgtatgtgccaaactggttctctgtggatcttaagactgggatgttgaccatcacgctg
gatgagagtgactgctttgctgcgtgggtgtcggccaaggatgcaggcttctccagtcct
gatggggctgatcccaaattgaacctgggtggactgctgctgcaggccttactggagtat
tggccccggacacacgtcaaccctatggatgaagaaaccgagatgaaccatgtgaacggg
gagcatgagagcaggatacagaaaggtaatggctacttccatgttccccctcacacgcca
gtcatctttggagaggcagggggaaggaccctgttcaggttgttgtgtcgagactcaggt
ggtgaaactgagtccatgttgctcaacgagaccgtgccacagtgggtcatcgacattacc
gtggataaaaatatgcccaaattcaacaaaatcccattctacctccagcctcattcttcc
tctggtgcaaaaaccttaaagaaggaccgtctgtcggccagcgacatgctacaggtgagg
aaggtgatggaacacgtatatgagaagatcataaacctggacaacgagtctcagacaggg
gcctcggggaacaacgacaagcccagcgagcagcagcagcagaaggaggaggaggacgtg
gccgtgctggccgaggagaagattgagctgctctgtcaggatcaggtattggatcccaac
atggacctgcggacggtcaagcattttatctggaagagtggcggagacctaacccttcac
tatcggcagaagtccacgtga
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