Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420664
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Entry
139420664 CDS
T10872
Name
(RefSeq) peroxisome biogenesis factor 2
KO
K06664
peroxin-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139420664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139420664
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
139420664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
Prok-RING_4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
DZR_2
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
139420664
NCBI-ProteinID:
XP_071026978
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All DBs
Position
11:18175546..18186879
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AA seq
327 aa
AA seq
DB search
MASTGGAHPPPEGGSGPDPQTPVLRINQLDAFELDSALDQLVWNQFSQCFQHFRPGLLTP
VEPELKALLQLLLWRFTVYPNSATVGQSMMNLRYHNTLSLSQRYRALSRRQRLGLALLTV
GPRWLTERSHSLLLSLGLGLGGSPPADGGLRLGLRRVLSLITGLTQVANLINFLVFLRKG
RHPSLTERILGIRAVFTKPQAVRDAAFQYMNRELLWHGFAEFLIFLLPLVNMRKIKTTMY
SLLYPLGVGEGGEEGVREGSAVWKECALCGEWPTMPHTVGCGHVFCYYCVKSHSIADAYL
TCPKCGVEVGEAKAVKLQIEITDIHAR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactggaggagcccatcccccaccagagggaggttcaggtccagaccctcag
actcctgtcttgaggatcaaccagctggatgcctttgagctggactctgctctggaccag
ctggtgtggaaccagttctcccagtgtttccaacacttccgcccaggcctgctcactccc
gtggagcctgaactcaaggccctgctccagctccttctctggaggttcacagtctacccc
aacagtgctacggtgggccagtctatgatgaacctccgttaccacaacactctgtcgcta
tcccagcgctacagggccctgagcaggagacagaggctgggcctggccctgctgacagtc
ggaccccgctggctgacggagcgatcccacagcttgctcctctccctggggttggggctg
ggcggcagtcccccggccgatggaggtctgcgtctgggactgcgtcgagttctttctctg
atcaccggccttacccaggtagccaatctgatcaacttcctggtgttcctgaggaagggg
cgccacccatctctgacagaaaggatcctgggtatccgtgcggtgttcactaagccccag
gcggtccgggatgcagccttccagtacatgaatagagagctgctgtggcacggcttcgct
gagttcctcatcttcctcctccctctagtcaacatgaggaagatcaagacaaccatgtac
tcacttctctaccccctaggagtgggtgagggaggggaggagggggtgagagagggctca
gcggtgtggaaggagtgtgctctgtgtggggagtggcctaccatgcctcacacggtaggt
tgtggtcatgtgttctgttactactgcgtcaagagtcactccatcgcagacgcctacctg
acatgtcctaagtgtggcgtagaagtcggggaggcaaaggctgtcaaactgcagatcgag
attactgacatccacgctagatga
DBGET
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