Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420700
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Entry
139420700 CDS
T10872
Name
(RefSeq) tubulin beta-5 chain-like isoform X1
KO
K07375
tubulin beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04517
IgSF CAM signaling
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139420700
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139420700
09144 Cellular community - eukaryotes
04540 Gap junction
139420700
09142 Cell motility
04814 Motor proteins
139420700
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139420700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139420700
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139420700
04147 Exosome [BR:
ocla04147
]
139420700
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139420700
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139420700
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139420700
Exosomal proteins of colorectal cancer cells
139420700
Exosomal proteins of bladder cancer cells
139420700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
139420700
NCBI-ProteinID:
XP_071027024
LinkDB
All DBs
Position
11:31906730..31909899
Genome browser
AA seq
446 aa
AA seq
DB search
MREIVHIQAGQCGNQIGTKFWEIISDEHGIDPAGNYVGDSSLQIDRINVYYNEASSHKYV
PRAVLVDLEPGTMDSVRSGTFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFSGQLNADLRKLSVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
AACDPHHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIAPRG
LKMASTFIGNSTAIQELFKRVSEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATANDGEETFDDEEEELNE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatagttcacatacaagccggacaatgtgggaatcagattggcaccaagttt
tgggaaattatcagcgatgaacacggaatcgatccggcaggaaactatgtgggtgactca
tcacttcaaatcgacaggattaatgtgtattacaacgaagcgtcctcacacaagtatgtt
cccagagcagtccttgtggacttggaacctgggaccatggacagtgtccggtcagggacc
tttggacagctattcagacctgacaactttatcttcgggcagacaggtgcagggaacaac
tgggccaagggccactacactgagggagcagagctagtagactctgtgctggatgtggtg
aggaaggagtgtgagaactgcgactgcctccagggcttccagctaacccactccctgggt
gggggcacaggctcgggcatgggcactctgctcatcagcaagatccgcgaggagtacccc
gaccgcatcatgaacacgttcagcgtcatgccctctcccaaggtgtcggatacggtggtt
gaaccgtacaatgccaccctctctgtgcaccagctggtggagaacacagacgagacatac
tgcattgacaacgaggcactctacgacatctgcttccgtaccctgaaactgaccacgccc
acttacggagacctcaaccatctggtgtcggccaccatgagcggcgtgaccacctcactg
cggttctccggtcagctcaacgccgaccttcgcaaactgtccgtcaacatggtgcccttc
ccccgcctgcatttcttcatgcctggttttgcaccgctaaccgcccgagggagccagcag
taccgcgccctgacggtgccggaactcacccagcagatgttcgatgcccgcaacatgatg
gcggcgtgcgacccacatcacggccgctacctcactgtggccactgtattccgcgggccc
atgtccatgaaggaggtggatgagcagatgctggccatccagaacaagaacagcagctac
ttcgtggagtggatccccaataacgtcaaggtggccgtgtgtgacatcgcacctcgcggc
ctcaagatggcctccacattcatcggcaacagtacagccatccaggagctgttcaagcgc
gtctcggagcagttctcggccatgttccgccgcaaggcctttctgcactggttcaccggg
gagggcatggacgagatggagttcactgaggcagagagcaacatgaacgacctagtgtct
gagtaccaacagtaccaggaggccacggccaatgacggggaagagacatttgacgatgag
gaagaagagctcaatgagtaa
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