Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420765
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Entry
139420765 CDS
T10872
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139420765
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
CD34_antigen
EVI2A
RIFIN
Motif
Other DBs
NCBI-GeneID:
139420765
NCBI-ProteinID:
XP_071027087
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Position
12:48865837..48874898
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AA seq
671 aa
AA seq
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MAAYLWLVLAIVSDVAESLLHPSRQLSHCQVVQNDVYCNDLNLRTVPAKLPHGIQKLDLS
RNLLQNLTQEVLSIYTTVHHLNLHSNKIQFIQPGLFKDMTNLQVLDLSSNYLDVFAVLKT
SIGPLAAVKRLDLSGNGLYTGMTDFFLSEAPELINLSLNGNSITKVGKETFCGSLALRNI
DLHNNVILEIDDGAFDSLIHLSELDLSINSITCITDFNLSQLKVLNLSRNSMECFQTTDS
DLEYELLYLDLRENKIHYFPVLPRKNKLIYLDLSRNRLMSINTTGTADEMEHFRDTFVPH
TQSGGTSLHQDLSRLMYLNMSYNQINSIPQSFFCSMVSLEHLNISNNCIRTFSVDQESPL
NSLKILDLSYNALQKLSFGENTLRSLQELFLQGNVLRNIDSGPFQRLPSIRGLHLQQNYL
KVCPSQRKPPQTDHNSQDPSGCVSFASIPSLHILNLSGNSLEVLPPYAFNGTMLRLLDLS
LNPGLDIHENSFSGLENFLTHLSLRENHITELNTDLSLLSSLKFVDLSTNKLSALPLWNK
EPSIESLNLQNNNLVTLEYDTVVVLERTLKTLYMGSNPLSCCSNPRFLNMLQHSNVVVPD
IATVTCHYMENSEIVELNIRSVTQEQCQKLDSKSASIIVIVVMALVLIVVLVVLSKVCHL
RRRNLNSSFRA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctacctctggctggtcctggctatcgtcagtgatgtggcagaatccttgtta
catccctcacgccagctctcccactgccaagtggtacagaatgatgtgtactgcaacgat
ctgaacctgaggactgttccggccaagcttcctcatggcatccaaaagctggatctatct
cggaaccttctacaaaaccttacccaagaggttctatcaatctacaccaccgttcatcat
ctgaacctccactccaacaagatccagttcatccagccgggtctgttcaaagacatgacc
aatctgcaagtgctggacctctccagtaattacttggatgtttttgctgttttgaaaacc
agcattgggcctcttgcggccgtgaagaggcttgacctctcaggcaatggcctgtacaca
gggatgaccgacttctttctcagtgaagccccagaactcattaacctttctctgaatggc
aatagtatcaccaaagtgggcaaggagaccttttgtggatctttggccttgagaaacatt
gaccttcacaacaatgtcatcttagagatcgatgatggagcatttgactcgctgatccat
ctgtccgagcttgatttgtccattaactccatcacttgtatcactgactttaacctttcc
caactgaaggtgctgaacctcagtaggaacagcatggagtgcttccaaaccacagactca
gacctagagtacgagctcctctacctcgacctgagggaaaacaagatccactacttcccc
gttctcccaagaaaaaacaagctcatatacctggatttgtccaggaaccgcctgatgagc
atcaacaccacggggacagcggatgagatggagcacttcagagacacgtttgtgcctcac
acacagtcaggtggaaccagcctacaccaggacctctcaaggcttatgtacctcaacatg
agctacaaccagatcaatagcataccacagtctttcttctgcagcatggtgtcccttgag
cacctcaacatcagtaataattgtatcaggaccttttctgtagatcaggagagccctttg
aactctctgaagatcctggacctgagttacaatgccctacagaaactctcgtttggggag
aacaccctaaggtcactgcaggaactcttcttacaagggaatgttctcagaaacatagac
tctggaccgttccaaagactgcccagcatcagaggccttcacctccagcagaactacctg
aaagtctgcccctcacagcgaaaaccaccacagacagaccacaactcccaggatccatca
ggctgtgtctcctttgcatccataccaagcttgcacatcttgaacctctctggaaacagt
cttgaagttctgccaccgtatgccttcaatggcaccatgctcaggttgctggacctgtcc
ctaaacccaggcttggatattcacgagaattctttctctggtctggagaacttcctaact
cacctgtcattgagagagaaccacatcacagaactgaacacagacctttccctgctaagc
agtctcaaatttgtggacctgtccaccaacaagctgagcgctctccccttgtggaacaag
gagccctccatagagtccctgaacctgcagaacaacaacctagtcaccctggagtacgac
acagtcgtggttctggagcggacgctcaaaaccctttacatgggctcgaaccccctcagt
tgctgtagcaacccccgcttcctcaacatgctccaacactccaatgtggtcgtcccggac
atcgccacagtaacctgccattacatggagaattcagagatagtggagttgaacattagg
agcgtgacgcaggaacagtgtcagaagctggacagtaagagcgctagcatcatcgtcatt
gtggtgatggctttggtgctgatcgtggtgctggtggtgctctccaaggtgtgccacctt
aggaggcgtaacctcaacagtagcttcagggcctga
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