Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420767
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Entry
139420767 CDS
T10872
Name
(RefSeq) nuclear speckle splicing regulatory protein 1-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139420767
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139420767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
139420767
NCBI-ProteinID:
XP_071027138
LinkDB
All DBs
Position
1:10950064..10977751
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AA seq
625 aa
AA seq
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MAEFSIDQNKLPGVKEVVRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAKAKAHRQHRDIERSDNEIAQEIQEELVRQAKQQRMQEEKDAAIARKLQEK
ERKEERKRQKQLEANFEEEYYEDNAILPPLNPASRASLDLDDKPRWPGSNSLSSERDAVE
TRTNSLSRYPEHHLEGREGRRGRHGDAHPEHHRSSSRGKHGDRYPDYHHPTEGRSRGKEE
QRSRDHQGSQSTFFADNHKPRRQREEEGDRVVRKKERPARPPPPSHIPVKRDEASDRARH
REWERDWERDRQGEPRKDEEIERDAPRQERHGERLRDQEHSRDKDRHRERTKSRERGLDE
VQDEPIPSSRSRAWDSGGEDAPSPGDDEEGKGGARARLTLLSGPSELCEEAARRSPRMGR
ERGERGHRDPGEGPSTGKECSHTHPAPRESGRIVQGGPGGRGAGNYGLGEATQGITKLDL
REQELLDMEVARKLQEEEVKVRELASKMDKRAAQVAQDEEIARLLMEREKMEYKKSREKE
KQGMRPEERRRPEGGDYKPSSEEVVHPRLREEEYQKPRNHQKPARPSQPPPHDYENVESS
FSGSHYSSGSPARPEASYKGVYYRQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttagcatcgatcagaacaaactgcctggagtaaaagaagttgttcgggat
tttgctgttctggaggaccactgcctggcccataacctacaggagcaggaaatcgagagc
cacttggcttccaacgtccacaagagccgtctggtgcagcaggacgtagcattggccaag
cagctgcaggaagaggaggaccggagggccaaggccaaggcccacagacagcacagagac
attgagcgcagtgacaatgagatcgcccaggagattcaggaggaactggtccgacaggcc
aagcagcagcggatgcaggaggagaaggatgcggccatcgctcgtaaactgcaggagaaa
gagaggaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataatgccatcctccctcccctcaacccagccagccgagcttctctggacctg
gatgacaaacccaggtggcctggttctaactctctctcttcggagagagatgctgtggag
actagaaccaactctctttctagataccctgagcaccatttagagggtagggaggggaga
aggggcaggcatggagatgcacaccctgagcaccaccgctccagtagcaggggcaaacat
ggagacaggtaccccgactaccaccaccccactgagggtagaagcagagggaaggaggaa
cagaggagcagagaccaccaggggtcccagtcaaccttctttgcagacaaccataagccc
aggagacagcgagaggaggagggggatagggtggtcaggaagaaggagaggcccgcccgg
ccgcccccaccatcccatatccctgtgaagagagacgaggcttcggatagagcgagacac
cgggagtgggagagagactgggaacgagacagacagggagaacccaggaaagatgaggaa
attgagagagacgcaccaagacaggaaagacacggggagcgattgagagaccaagagcat
agccgagacaaagacagacaccgagagagaaccaagagcagggagcgaggtctggatgaa
gttcaggacgagcccatccccagtagccgcagcagggcctgggacagtggtggggaggat
gcccctagccctggggatgatgaagaggggaaagggggggccagggcccgcctgacgctc
ctctctggccccagtgagctgtgtgaggaggcggcaaggaggagccccaggatggggaga
gagcgaggggagaggggacacagggaccctggggagggccccagcacgggcaaggaatgc
tcccatactcaccccgctcccagggagtcaggtcgtatcgtgcaaggaggaccagggggt
cgtggagcagggaattacgggctgggtgaggccacccagggcatcactaagctggacctg
cgggagcaggagctgctggacatggaggtggcccggaaactacaggaggaagaggtgaag
gtgagagaactggcaagcaagatggacaagcgtgcggcccaagtggctcaggatgaggaa
atagcccggctgctgatggagcgggagaagatggagtacaagaagtccagagagaaggag
aagcaggggatgaggcccgaagagaggaggaggccagagggaggagactacaagccaagc
tcagaggaggtagtgcatcccagactacgagaggaggaataccagaagcccaggaaccac
caaaagcctgccaggccttctcaacctcctccccatgactatgagaatgtggagtccagc
ttctcagggagccactattcttccgggtctccagcgcgacctgaggcgtcttacaaaggt
gtctattacagacagtga
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