KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420792
Entry
139420792         CDS       T10872                                 
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061  Fatty acid biosynthesis
ocla00071  Fatty acid degradation
ocla01100  Metabolic pathways
ocla01212  Fatty acid metabolism
ocla03320  PPAR signaling pathway
ocla04146  Peroxisome
ocla04216  Ferroptosis
ocla04920  Adipocytokine signaling pathway
Module
ocla_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    139420792
   00071 Fatty acid degradation
    139420792
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    139420792
  09143 Cell growth and death
   04216 Ferroptosis
    139420792
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139420792
   03320 PPAR signaling pathway
    139420792
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ocla01004]
    139420792
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139420792
Enzymes [BR:ocla01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     139420792
Lipid biosynthesis proteins [BR:ocla01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   139420792
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139420792
  Exosomal proteins of breast cancer cells
   139420792
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 139420792
NCBI-ProteinID: XP_071027166
LinkDB
Position
12:complement(51934440..51980262)
AA seq 723 aa
MLSFVLVSGSVWIILELSSTLMERMQAQELMSSLRLPELDELTQFFRSLPTSTLVGIGAL
TAVLAYWLATRPRAISPPCNLRHQSEEVLHEDGVRRSMLGDNPNKLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPNQPYKWLSYKEVTTRAEHLGSGLLSQGCTPSPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIITVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDPALLEQGEGCGVIVQSMQDVEALGREKHRNPMPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVISPNQDDVLISFLPLAHMFERLIESVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSSGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEVCVKGPNV
FKGYLKDPGRTAETIDTDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIYVHNELFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgctttccttcgttctggtctctgggtctgtctggataatattagagctgagttccacc
ctgatggagaggatgcaggcccaggagctaatgagcagtctacggctgcctgagctggat
gagttaacccagttcttccgctccctgcccacctccacactggtgggaatcggtgctctg
actgctgtgctggcctactggctggccacacggccacgcgccatctctcctccctgcaac
ctccggcaccagtctgaggaagtgctgcatgaagatggggttcgcaggtccatgctgggg
gacaaccccaataagctgctgacacactaccatgaggatgccaagaccatgtacgaggtg
ttccagagaggcctccacatagccggtgatgggccttgtttaggctcccggctacccaac
cagccttacaagtggctgtcctataaagaggtcacgacccgggcggagcacttggggtcg
gggctgctgagccagggctgcacgccaagcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacggtacatcattaacactgccgacatc
atcacagtgatctgtgacaagcctgagaaggcccaggtgctgctgggtaacgtggagagg
caggaaacccccgggctgaagaggatcatcctcatggacccctttgaccctgcactgctg
gagcagggggaaggctgcggggtcatcgtccagtccatgcaagacgttgaggcactgggc
agagagaagcatagaaatcccatgccacctacaccagaagacctgtccattgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacacgggaatgtagtggct
gatttctcaggcttcctcaaagtcacagataaagtcatatccccaaaccaagacgatgtt
ctcatctccttcctgcctttggctcacatgtttgagagactcatcgagtctgtggtgtat
tgtcatggtggccggatcggctttttccaaggtgacatccgcctgctgtctgatgacatg
aaggccttacggcccaccatcttccctgtggtgcctcgattgctcaaccgcatgtacgac
aagatcttcagccaggccaacaccccattgaagcgctggctgctgaactttgcagccaag
agaaaaggggcagaggtcagcagtgggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgtatgattgtaactggagct
gctccggcctcccccaccgtactgggatttctcagggcagcactgggttgtcaggtgtat
gaggcgtatggtcagacggagtgtactgctggttgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccactgccatgtaacctcatcaagctggtggatgtggct
gaaaagaactactttgctgccaaaggagaaggagaggtgtgtgtgaaagggcccaatgtt
tttaagggctaccttaaagacccagggaggacggctgaaacgatagacacagacggttgg
ctccacacaggagacatagggaaatggttacctaacggtacactaaagatcattgaccgg
aaaaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagtctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcttgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgtcctgaagaaagccatcatg
gaagacttgcagcgactgggcaaggcgagcggcctccactcgtttgagcaggtgaaaaac
atctacgtccataatgagctattctcgatacagaatggcctgttgactccgacactaaaa
gcaaagagacctgagctgagggagtttttcaaggagaagattgaagacctgtacgaaaac
atctccatgtga

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