Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420848
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Entry
139420848 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 23 member 1-like
KO
K14611
solute carrier family 23 (nucleobase transporter), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
139420848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139420848
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC23: Na+-dependent ascorbic acid transporter
139420848
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GFIT
Motif
Pfam:
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
139420848
NCBI-ProteinID:
XP_071027296
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Position
12:complement(56646641..56655614)
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AA seq
605 aa
AA seq
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MQHTETQPDHKSDVIQSQTEEQEQSAEGGKLAAEQQKQQPGFDMIYTIEDVPPWYLCILL
GLQHYLTCFSGTIAVPFLLAEAMCVGKDQNTVSQLVGTIFTCVGITTLIQTTFGVRLPLF
QASAFAFLIPAQAILGLDRWKCPPEEEIYGDWSLPLNTTHIWHPRMREIQGAIIASSAVE
VVIGLVGLPGLLLDYIGPLTVTPTVSLIGLSVFQTAGDRAGSHWGLSALCIFLIVLFAQY
LRNWSFPFLTYNRKKGFSITRFQIFKMFPIIMAIMLVWLLCYILTLTDVLPSDPSKYGQK
ARTDARGDIMTLSPWFRFPYPCQWGLPTVTIAGVLGMFSATLAGIIESIGDYYACARLSG
APPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIM
FLLGTVGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQSVDLNSSRNLFVLGFSMFF
GLMLPSYLDLHPGCIKTGVAEVDQILTVLLTTEMFVGGFLAFALDNTIPGTRKERGLLDW
KADEGSVGSSANIHTTYDFPIGMSCVRKISCLRYLPICPSFXHELRERTESVRMDTTITL
ACTKV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacacagagacacaaccagaccacaagagtgatgtcatccagagtcagacagag
gaacaggagcagagtgccgagggggggaaactggctgccgagcagcagaagcagcagccg
ggctttgacatgatctacaccatagaggatgtcccaccgtggtacctctgcattctactg
ggcctccagcactacctgacgtgttttagcgggaccatcgctgtgcccttcctgctagcg
gaggccatgtgtgtgggaaaggaccagaacactgtcagtcagctggtgggaaccatcttc
acctgcgtgggaatcaccacactcattcaaaccacctttggagtcaggttacctcttttc
caggccagtgcttttgctttcctcatccctgctcaagctatcctagggctggatagatgg
aaatgtccccctgaagaggagatttatggggactggagtcttcctctgaacaccacccac
atctggcacccaagaatgagagagatccagggtgccatcatagcatccagtgcagtggag
gtggtcatcgggctggtgggtctccctggtctcctcctggactacatcgggcccctgacc
gtcacccccaccgtgtccctcatcggcctgtctgtcttccagacagctggggacagagcc
ggctctcactggggcctctcagcactgtgcatcttcctcatcgtgctatttgctcagtac
ctgaggaactggtccttccctttcctcacctacaacaggaagaaaggcttcagcatcacc
aggttccagatctttaagatgttcccgattatcatggccatcatgttggtgtggctgctg
tgttacatcctgaccctgaccgacgtgctgcccagtgaccccagcaagtacggacagaag
gcacgcaccgatgcgcgcggtgacatcatgaccctctcaccctggttccgcttcccctac
ccctgtcagtgggggttgcccacggtgaccatcgccggagtgctgggcatgttcagtgcc
acactagctggcattatagagtctatcggggactattacgcctgtgctcgcctctcaggg
gcacctccgccacctgtccatgccatcaacaggggtattttcacagagggggtgtgctgt
attatagcaggactgctgggtacaggaaatggctccacctcctccagtcccaacattgga
gttctgggaatcactaaggtgggcagcaggagagtggtgcaatatggtgcagccataatg
ttcctgttaggaacagtggggaaattcactgccctcttcgcatctctgcctgaccccatt
ctaggtggcatgttctgcaccttgttcggtatgatcacggctgtgggcttgtccaacctg
cagagcgtagacctcaactcctctaggaatctctttgtcctcggcttctccatgttcttc
ggtctcatgctgcccagctacctagacttgcaccctggctgcatcaaaacaggagttgca
gaggtggatcaaatcctcacagtgctcctaaccactgagatgtttgttggaggcttcctg
gcgtttgctctggataacaccatcccaggcacaaggaaggagagagggctgttggactgg
aaggctgatgagggcagtgtgggaagctccgcgaacatacatactacttatgactttccc
attggaatgagctgcgttaggaagatcagctgcctgcgctatctccccatctgccccagc
ttcnnccatgaattaagagagaggactgagagtgtacgcatggacacaacaattaccttg
gcctgcaccaaagtatag
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