Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420870
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Entry
139420870 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139420870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139420870
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139420870
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139420870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
139420870
NCBI-ProteinID:
XP_071027345
LinkDB
All DBs
Position
12:58547408..58709550
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AA seq
862 aa
AA seq
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MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDKDAALELHESDSLPLPVVLVKAKDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILVIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQSQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPRASEGGVHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRKDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREHAQGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSTEVHGHGIEGQDHELSLSPPSGPPPALVAPAPLAAPAPCCHQDHGRGGHPHRRAD
RLGGFVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALG
GLEDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRSHHGHHSPAHDRN
TDFCLYCQTLHNNQGSEEESGV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctaagacacgagcccacggggaagcccatc
actctggaagggctgttcgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcattgtcaagctggagagcccggagcgcaaggtgcctcagtgtctgcccctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aaagacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctaaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggtcatcgttctgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagtcccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgagccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccctgggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccgcgcctccgaagggggagtccatagccggggggccgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctccctgagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcaaggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagagggcgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcacgcccagggacaggggccaggcaggggg
tcagacgaggagcagggggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtacggaggtccacggccacgggatagagggtcaggaccatgagctt
agcctcagccccccgtcaggcccccctcctgccctggtagcaccagcacccttagcagct
ccagccccctgctgccaccaggaccacggccgtggaggccacccccatcggagggcagac
cggctcggcggcttcgtcctcgatggcccctcggtgctcttccaccagagcctggaactg
caggatgactgtagcatccacattcactacggccagggccccagctactgctgccccccg
cctgacctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctaggg
ggcctagaggactggccctgctgtggagggccccaccatgtagtgtggcagaagcgggtg
cagcaggcccactctgagccccagttgctggggccagggctggggggccctatggacaga
cccccgcccccatgcagcaggagtcaccacggtcaccacagcccagcgcacgaccgcaac
acagacttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtcc
ggtgtgtga
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