Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420900
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Entry
139420900 CDS
T10872
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139420900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139420900
Spliceosome [BR:
ocla03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
139420900
Complex B
139420900
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Paralog
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Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
139420900
NCBI-ProteinID:
XP_071027411
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All DBs
Position
12:complement(61352522..61365192)
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AA seq
501 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPFLTQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETRDERLERKRREKIERRQTVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIYIVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDHPPIGGERERERGPEPRGE
RRERSRERERGGEKERGGERRRSRSRERRRRSSRSRERGDRGLGLAGPAEESVGGGRRRD
RERERGGGGPGGDSHSRERSRDKGERKRRSRSRERKRDRERGKGGEGDEGMGLGDGMMGE
GGEKMPEEPSVGEEGGEVGEERGGRERDRDRERDRDRRRSHRDKDRERDRERHRGDREKD
REHKRDRERGGGERREDRHGSLLPPSAEQDDVGNGEAGEAPPQPEENSQDGLMMDQDSVQ
SGEGYVSNENGYKVETQADEY
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttttaccccccaatctgctggccctatttgcgccccgggaccccatacca
tttctgacccagttggagaagcttccccatgaaaaacaccacaaccagccatactgtggc
atcgctcccttcatcaggcactttgaggaccccagagatgcccctccccccactagggca
gaaactcgcgatgagaggttggagaggaagaggagggagaagatcgagaggaggcagacg
gttgtggagacagaactgaagctctgggatccacacaatgaccccaatgctcagggggat
gccttcaagaccctgtttgtggctcgtgtgaattatgacaccacggaatccaagcttcgc
cgtgagtttgaggtctacggacccatcaaacggatctacatcgtctacaacaagaggtca
gggaagcccagaggctacgccttcatagagtacgagcacgagagagacatgcactctgcc
tacaagcatgcagacgggaagaagatcgatggaaggagagtgctggtggatgttgagaga
ggccgcactgtgaagggatggcatccccgcaggctaggcggtggtcttggtgggacaagg
agaggcggggctgacgtcaacatcaagcactctggaagagacgacacctcacgttacgat
gaccaccccccaattggaggggaacgagagcgcgaacgtggacctgagcccagaggggag
cgcagagagcgtagccgtgagcgtgaacgtgggggggagaaagagcgcggtggcgaaaga
cggcggtcccggtcccgggaaagacgcaggcgcagctcccgctccagggagaggggcgac
aggggtctgggcctggcagggcccgcagaggagagcgtagggggtggcaggaggagagat
cgagagagggagcgggggggaggaggaccagggggagacagtcatagcagggagaggagc
agagacaagggtgaaaggaagaggaggagccgcagcagagagcgcaagcgagaccgggag
aggggcaagggtggcgagggggatgagggcatggggcttggagatggtatgatgggggag
ggaggagagaagatgcctgaagagcctagtgtgggtgaggaagggggagaggtgggagag
gagcgcggcgggagggagcgggacagagacagggagcgggaccgtgaccggaggcgcagc
cacagggacaaggaccgggagagggaccgggagaggcacaggggggacagggagaaggac
agggagcataagagagacagggagcggggtggcggggagcgcagggaagaccggcatggc
tctctcctgcccccctcggccgagcaggacgatgtaggtaacggggaggcgggggaagca
ccgccccagccagaggagaacagccaggatgggttgatgatggaccaggactcggtgcag
tcgggggagggctacgtttccaatgagaacggctacaaggtggagacccaggcagacgag
tactaa
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