Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420923
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Entry
139420923 CDS
T10872
Name
(RefSeq) ephrin-A1-like
KO
K05462
ephrin-A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139420923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139420923
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139420923
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139420923
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139420923
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139420923
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139420923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
139420923
NCBI-ProteinID:
XP_071027448
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All DBs
Position
2:10225073..10238991
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AA seq
236 aa
AA seq
DB search
MDLVWLVCLAVSFGTWFASAERHSVFWNSTNPNFLWDEYTVEVKINDYLDIICPHYTRGE
LPSQEAERYVLYMVEKEDYEVCKPHSFDQLRWECSRPFAAHAPERFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVGPHGSGKAKADKGKDGAMEEAMDGGKGKMG
GGGGGGVHNPSNRLPADDPTVLEPKVQKSVGSSGVQLVSLSVFFTLFPVLLSLLLY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtgtggctggtgtgtctggctgtgagcttcggaacctggttcgcctccgca
gagagacatagcgtcttctggaatagcacaaacccaaatttcctatgggatgagtacaca
gtggaggtgaaaatcaacgactacctggacatcatctgtcctcactacacgcgcggggag
ctgccatcccaggaggctgagcggtacgtgctgtacatggtagagaaggaggactatgag
gtgtgtaagccccactccttcgaccagctgcgttgggaatgttcccggcccttcgctgcc
cacgcccccgagaggttctccgagaagttccagcgcttcacccccttcaccctgggcaag
gaattcagacagggagagagctactactatatctccaagccgctgcatcaccacggccag
gagtgtctgagactgaaggtggatgtggttggacctcatggttctgggaaggccaaggct
gacaaaggcaaggatggagcgatggaggaagcgatggatggaggaaagggaaagatgggg
ggaggaggaggaggaggagtgcacaacccctccaacaggcttccagccgatgaccctact
gtgttggagcctaaggttcagaagagtgtgggtagttcaggtgttcagctggtctccctg
tcggtcttcttcaccctgttccccgtcctactatccctgttactatattga
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