KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420952
Entry
139420952         CDS       T10872                                 
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocla03019]
    139420952
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139420952
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 139420952
NCBI-ProteinID: XP_071027487
LinkDB
Position
12:62629716..62649714
AA seq 992 aa
MSFRRQNQQPGSCGRKTSNGTAGPAGLPPHISGSNTNRAVPGRTRNTMKPPSQSSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEADGDG
GGGLPPSLPRIEEITDTMIFSPGDLVTMTCRDVDLNYAIRDAFTDTAISSSRVNGEHREK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSREGKYIPLPQRAREMGVSPSSLRGGASGPIPSRTGVPGSSRPSQGSDRSSPLSVRS
AYSPHQSQASPPAQPSSPTPSSSSHPIPHSISHPQALADASRSSVNGVSSRTSPKAQRSV
QTNRTLRNPSSQSSPAVSRSPKLDDPVLAGPAYLDTSSSIASATPKSSGPTPLFTVDVNE
ILSSAAKERTEGPASPQDGKSGKVPSVLQRTQLEELRKFGKEFRLQPSSSPSAGPTSSEP
AQPSPSDSTTTAESIPAPGHTLSQDPQTGEGSSFTPNPTTPTPSPAPNTTCQSSGPDRQA
AGTPQPARTPGSEEGGERVEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRPTP
LSPSVVLQPPPGQQAIYSTPYLSYLSPVQIQGHSVQPPQMYQYTMSTVQQGKYPRAKGQV
VGPRPDHHGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPVYSMLQG
GARMLTQAGHPQALGPPGPQYPGQTEGPPGPQQTMYAPQQFSHHSSSMHPPQPSSTPTGS
QPPPQHTAPSPGHGQSGQGGPQPQSMYHSGPLPAPTPPNMPPGHSSPQASYPMQGYSLPT
HQPMAQHYPGLGQLTQAHVAQGMSGPHHQGGHGPPQMMLHYAPPPQQGPGSAQQHGPPPQ
QGAHQHYYIQHPQAVQVQAHPTQQLSFHPPGN
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgtcttttcgtcgacagaaccaacaacccggttcatgcggacgaaaaacctccaatgga
acggcagggccagccggtttaccccctcatatcagcgggagtaataccaacagagctgtg
cctggaaggacaagaaatacaatgaagccgccatctcagtcctctcccgtatttgaaggt
gtctacaacaacaccaggatgcttcactatctcacagctgtagtgggctccacctgtgac
gtccgagtgaagagtggaaatgtgtatgaaggcatcttcaagaccctcagctcaaggtgt
gagctggtggtcgacgcagtccacaagaggagtgagggaggagaggcggatggagacgga
gggggaggcttgccaccctctctgcccaggatcgaggagatcacagacaccatgatcttc
agccccggcgacctggtcacaatgacttgccgagatgtggacctcaactacgccatcaga
gatgctttcacagatacagcaatcagctcatcgcgggtgaacggggaacaccgggagaag
gtgctgcagcggtgggacggaggcgacagcaatggagaaggcttcgacctggagactgac
acgtctaatggctgggatgccagcgaaatgttcaagtttaacgaggagacatatggcgtc
acgtccacctacgattccagcctctccatgtacactgttcccctggaacggggcagctcg
gatggcttccggcagcgagaggcacgtgcggcccgcctagcgaatgagatcgagggaagc
ccccagtaccgtcaccgcaccaacctggagaacgacgataagagcgaggaggacaagtac
agcgccgtggtccgagagagagatgaggggagggagaggggcagccctggattccagagt
agtgccgggagcagggagggtaaatacattcctcttccccagagggccagggagatgggt
gtgtcccccagcagcctgaggggcggagcctctggtccaatacccagtcgaacaggagtc
cccggctcttctaggccctcccagggttctgataggagcagcccgttgtccgtcaggagc
gcctactctccccaccagtcccaagccagccccccggcccagcccagtagccctaccccc
tcttcctcctctcatccgatccctcactccatctctcacccacaagctctagctgatgcc
tcacgctcttctgtcaacggagtgtcatccagaacttctcccaaagcccagagatccgta
cagaccaatagaactctgcgcaacccaagttcccagtcctcacctgcagtctctcgctct
ccaaaactagatgaccccgttctggctggccctgcctacctggacacttcctcctcgatc
gcctcggcaacacccaagtcctctggccccacccctctgttcactgtggatgtgaatgag
atcttgagctcagcggctaaggagaggacagaaggcccagccagccctcaggacggcaag
agcggcaaagttccctcagtcctgcagagaacacagctggaggagctccggaaatttggc
aaagagttcaggctccagcccagctcctccccttctgctggccccacttcctcagagccc
gcccaaccctccccatcagactccaccaccacagccgagtctatacccgcccctggccac
accctctcccaggacccccagactggagaggggtcctccttcaccccgaaccccaccacc
cctaccccctctccagcccccaacaccacctgtcagtcatcaggtccagacagacaggct
gcagggacaccccagccagccaggacccctggcagcgaggagggcggcgagcgagtggag
ggcgtggctgaccaggtgaagaagtctacgctgaaccccaatgccaaagagttcgtcttc
aaggcacccatgaccctggtgaagccgtccccagcccccacccccccgcggcccactcct
ctcagcccctccgtggtgctccagccccccccgggacaacaggcaatctacagcaccccc
tacctgtcctacctctcccctgtacagatacagggacactctgtacagcctccccagatg
tatcagtacaccatgtccacagtccagcaggggaagtatcccagagctaaaggccaggtg
gtaggccctcgtccggaccaccacggctcttctcagccccagatgctccaggctgcagcg
tctgcagcaggccctcccctggtggcctccccctacccccaggcctacctgcagtacagt
caggtcatccagggcatgccccactaccccggacagccggtgtactccatgctgcagggt
ggggccaggatgttgactcaggcaggccacccccaggctctgggccccccaggccctcag
taccctggacagacagaggggcccccgggaccacaacagaccatgtatgctccccagcag
ttctcccaccattctagctccatgcaccctccgcagccctccagcacacctactgggagc
cagccccctccccagcacactgcccccagccctgggcacggacagtcgggccagggaggc
ccccaaccccagtccatgtaccactctgggcccctgccagcacccacaccccctaacatg
ccccctggccacagctctccccaggcctcttaccccatgcagggctacagcctgcccacc
caccagcccatggcccaacactaccccggcctgggacagctcacacaggcccatgttgcc
caaggtatgtctggcccccaccaccaaggaggccacggcccgccccagatgatgctgcac
tacgccccgcccccacagcaaggcccaggctccgcccagcagcacggccctcccccccag
cagggggcgcaccaacactactacatccaacacccacaggctgtacaggtgcaggctcac
cccacccagcagctctccttccacccccctggaaactga

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