Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420959
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Entry
139420959 CDS
T10872
Name
(RefSeq) RNA-binding protein FUS isoform X1
KO
K13098
RNA-binding protein FUS
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139420959
09122 Translation
03015 mRNA surveillance pathway
139420959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139420959
Spliceosome [BR:
ocla03041
]
Complex A
Other components
Complex A specific factors
139420959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Kazal_1
Motif
Other DBs
NCBI-GeneID:
139420959
NCBI-ProteinID:
XP_071027496
LinkDB
All DBs
Position
12:complement(62272248..62294622)
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AA seq
543 aa
AA seq
DB search
MASNDYPPTAAQGYGSYGGGQASLIGYSQSSTQQGYGSSGGYNQSSEGNSASCGQGGYGS
NYGQSQSGGYGSQPPSQGGQPYSSGGYNNNSSSSQPPQSGYNQQSPYSGYGQGQSAAQSS
TSSYGNNSQPSSFGQQQSQSGGGGSYGSQSGSGYGGSGVGQSGAYGGSGGQQQPGGAPYS
QAPSYSSPQSYGQQTKYSQGGGGYRGNSPPMGGGGGGGYGGSDGGYGDSGGRGRGERGGG
FRGRGDGDRGFDRGGGQRGTGGMGMGDRGGFNKFGGPRDQGPVGPSSMEDQDNSDNNTIF
VQGMGDGYTVDSVADFFKQIGIIKINKKTGLPMINLYTDRETGKLKGEATVSFDDPPSAK
AAIDWFDGKDFKGNPIKVSFATRRADFGVGRGGAGGMRGERGGEAEFGGPMGRGGFGGGR
GGGGGGLSGDNGGRGNGGQQRAGDWKCSNPVCGNLNFSWRNECNQCKSSKPEGTGGGMSP
MDGGGGFGGDRGGRGGFDRGGFRGRGGDRGGFRGGRGGDRGGFGPGKMDGRGEHRQDRRD
RPY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatgattaccctccgactgcagcccagggatatgggtcctatggtggtggc
caggccagcctgattggctacagtcagtcgtccacccagcagggctacggcagcagtggc
ggctacaaccagagctctgagggcaactccgcctcctgcggccagggaggctacgggtct
aactacggccagtcgcagtcaggaggatatggttctcagcctccatcccagggcggtcag
ccctacagctctgggggctacaacaacaacagtagtagtagtcagccaccacagagcggc
tacaaccagcagtcgccctactctggatatggacaagggcagtctgctgcacagtcttct
accagtagctatggcaacaactcccagccatctagcttcgggcagcagcagtcgcagagt
gggggcgggggcagctatgggagccagagcggaagtggctacgggggtagtggcgttgga
cagagtggggcttatgggggcagcgggggtcagcagcagcccgggggggctccctacagc
caggcccccagctacagctcaccccagagctatggccagcagaccaagtacagtcagggg
ggtggaggatacagaggcaactctccaccaatgggaggagggggtggaggagggtatggt
ggctcggacggaggctacggagatagtggagggcgaggccgtggagaaaggggaggcggc
tttaggggtcgcggggatggtgaccgaggatttgaccgaggtggcggccaaagaggcact
ggcggcatgggaatgggcgatcgtggaggattcaataagtttggtggaccgagagaccag
ggacctgttgggcccagctccatggaagaccaggataactctgacaacaacaccatcttc
gtgcaaggcatgggagatggctacaccgttgattctgtggctgacttcttcaagcagatc
ggcatcatcaagatcaataagaagactggtctgcccatgatcaacctgtatacagaccga
gagacagggaagctgaagggcgaggccaccgtgtcctttgacgaccccccttctgccaaa
gctgccatcgactggtttgatgggaaggacttcaaagggaaccccatcaaggtgtccttt
gcgacccgcagggcggacttcggagtaggccggggtggggctggcggcatgagaggagaa
cgaggaggtgaggcagagtttggtgggccgatgggtcgtggcggattcggaggtggtaga
ggaggtggtggtggtggtctctctggcgacaacggtggccgtggcaatggaggacagcag
agagctggagactggaagtgttccaacccggtgtgtgggaacctgaacttttcgtggagg
aacgagtgtaaccagtgcaagtcctccaaaccagaggggaccggaggtggcatgtctcct
atggatggaggcggaggttttggtggagaccgagggggtcgtgggggttttgaccgtggg
ggattccggggccgagggggtgacagaggtgggttccgaggcggacgcggaggcgacagg
ggtggattcggaccgggcaaaatggatggaaggggtgaacacagacaggaccgcagagac
aggccctactag
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