KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421041
Entry
139421041         CDS       T10872                                 
Name
(RefSeq) bromodomain-containing protein 4-like
  KO
K11722  bromodomain-containing protein 4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ocla01001]
    139421041
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139421041
   03036 Chromosome and associated proteins [BR:ocla03036]
    139421041
Protein kinases [BR:ocla01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   139421041
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     139421041
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    139421041
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 139421041
NCBI-ProteinID: XP_071027636
LinkDB
Position
12:64244758..64281602
AA seq 1622 aa
MDYKMHAKSNDLLDFQTLDALLEKMAHYSSVSVKREASEECNGISGALSVESSAPPSRLN
NWCPAATAAPTPTLAPAPAPVPAPPVTSARMGDGLDATTVQMSSSGSSSSSQGGQPQPST
YVPTVPEFNPPPPEYINPSQPKRQTNQLQYLLKAVLKTLWKHHFSWPFQAPVDAVKLNLP
DYYKIIKVPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEQLEK
MFLQKITEMPQDETEIAVMTGKGRGRGRREGGLNLKPGLTMDSPSTTPQTRGFSSHSPGP
QTRGPPVQQQTQDQGPPSLPPQPLMQALPSRVPPTLPVHTHAHAPQLGAPYSLGPSDLPL
QAPPKLPIMTTVPPPPTQTTLPPTSIQSTAPILQNPMPMAKQRKSQKRKADTTTPTANDQ
LSESSPAESKSGKTLPRRESARPTKLLKKEAPDSQHHLGLGIGLGLGGPIGPGVGAHSPK
QQEQLRYCSSLVRDMLHKKHAAYAWPFYKPVDVDMLGLHDYHDIIKHPMDLATVKVKLDN
RQYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEETLASAP
APALLQSSAPIIKSQPPPILNPASSILGPASSVKHPASSSDSSSDSSSESESSTNDLEEE
RAQRLAELQEQLKAVHEQLAALSQPQASKPKRKEKEKKKDKHKRKGAVEEIPEPAIQFPK
KTKNNNSSSSNNNNKELLPKKTKKPSKKEGGAVKNNRSSALGPQAAQQPPALQPVSGLGE
GLEEDPAAAGVPGEKGKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDE
IEIDFETLKPSTLRELERYVSSCLRKNKKKVPVAEKTMEAMTAAKTKASSSSDSDSSDSS
SSDSDEEKGVAPKQKQKKGHGTNEGKKPHLHHAMSGAGPVPQGHPHAQAPVLQPSIHLKQ
QQHNPSPATYMAPPLPVTVTALESSQLLENTFDSLPHFGQQPLMHLSQHHHSSSPAVPPH
LNAHSAAGPVSPETHPFLNQHPILPNPNPALHNALPQQPSRPSHRAAALPPKPLQQQQPA
PQPTLQQQQQQQQQLQPQAPPPQHHLPPHILHPTPPQSLQQRPLSPPTLTPQGLLSSQPP
QMLLEDDEEVIPPLPQMHLYLQQGQSQGQSQGRPGQQPHNPQQIMQSLQVRQQQNQAPLL
QSVQVQTSSLQPPQLSVQPPQPQSKPIPPSRQILPPHQVARHLQQHAQMGYPSQGPVAQQ
TGHSDRQATAGQHKGSMQASAKAQHIIQQQQHPSPRQIKADPYNSGHLRENPSPIMMHSP
HLPQYPPITHQSPPHNLQPKKEQRAPPALVALKEEKLPPSPVMRGGEPFSPAMRQDPHKH
PDSHSKPSLPGHAQQKSMDSSRPVIRSSEPSGPPSSSSSLPDKDKFKQEPKTPIAPKKVQ
DVKLKNMGSWASLAQKSTSAPLSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQAERDK
LRREQEKLRGRDRDDEDILEPQQQSRRVHEEPRSRRLEQQQHIPAPQPQQQPQAPTPQAQ
AQPAALSQPPQAPTPPQPSAQDQQRELARRREQERRRREAMAATIDMNFQSDLMAIFEEN
LF
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggattacaagatgcatgccaagtctaacgatctgctggattttcagactctggatgct
cttttggaaaaaatggcacattattcttctgtctctgtgaaaagagaggctagtgaggag
tgcaatggaatcagcggtgctctctcagtggagtcgtccgcgccgccgtcgagactgaac
aactggtgtcccgcggccaccgccgcccctaccccaacccttgcccctgctccggcccct
gtgcccgcgcccccagtcacctccgcaagaatgggggacggcctggatgcaaccacagtg
cagatgtcttcgtcaggcagcagtagcagtagccagggggggcagccccagccctccacc
tacgtacccaccgtgccagagtttaacccaccgcccccggagtacatcaacccgtcgcag
cccaagcggcagaccaaccagctgcagtacctgctcaaggcggtgctgaagaccctgtgg
aagcaccacttctcctggcccttccaggcacctgtcgacgccgtcaaactcaacctgccg
gactactacaagattattaaagttcctatggatatgggaacaatcaagaagcgacttgag
aacagctactactggaacgcccaagaatgtattcaagatttcaacaccatgttcaccaac
tgctacatttacaacaagcctggagatgacatagtgttaatggctgagcagctggagaag
atgtttctccagaagattactgagatgccccaggacgagacagagattgctgtcatgacc
ggcaagggtcgaggccggggccgacgggaaggaggtctgaacttgaagccaggcctgact
atggattctccgtccaccaccccccagacacggggcttctccagccactccccaggcccc
cagaccagaggaccaccagtgcagcaacagacccaggaccaggggcctccatctctacct
cctcagcccctcatgcaggccctgccctcccgcgtgcccccaacgctacctgtccacacc
catgcccacgcgccacagctcggggccccctactcactgggcccgtcggacctgccactc
caggcccctcctaagctccctatcatgaccaccgtgcctcctccccccacccagaccacc
ctgccccccacgtccattcagagcaccgcccccatactgcagaaccccatgcccatggcc
aaacagagaaagagccagaaaaggaaagccgacacgaccacccccacggccaacgaccag
ctgagcgagtcttctccggctgagtccaagtcgggcaagacgctgccgcggcgagaaagc
gcaaggcccaccaagcttctcaagaaggaggctccggactcccagcaccacctgggcctc
gggataggtctcggtctcgggggacccataggaccaggggtaggggctcatagccccaag
cagcaggagcagctacgatactgctccagcttggtccgagacatgttacataagaagcac
gctgcctacgcctggcccttctacaagccagtcgacgtggacatgctggggctgcacgac
taccacgacatcatcaaacaccccatggacctcgccaccgtcaaggtgaagctggacaac
cggcagtacagagacgcccaggagtttgctgccgacgtgcggttaatgttctccaactgc
tacaagtacaacccacccgaccacgaggtggtggcgatggcacgcaaactacaggacgtg
tttgagatgcgctttgccaagatgccagacgagcccgaggagacgctggcttcggctcct
gcccccgcgctgctccagtcctctgcccccatcatcaagtcccaaccgccgcccatccta
aaccccgcctcctccattctaggtcctgcctcctcggtcaaacaccccgcttcctcctcg
gacagctccagtgattcgtcatcggagtcggaatcgtccacaaacgacttggaggaggag
agagcccagagactggccgagctacaggaacagctcaaagctgtccacgagcagctggcg
gccctctcgcagccacaggccagcaaaccaaagagaaaagagaaggagaagaagaaagac
aagcacaaaaggaaaggagcggtggaggagatcccggagccggccattcagttccccaag
aagaccaagaacaacaacagcagcagcagcaacaacaacaacaaggagctcctgcccaag
aagaccaagaaacccagtaagaaggagggaggtgcggtgaagaacaaccgctcctcagcc
ctgggccctcaggcagcgcagcagcccccagctctgcagcctgtgtctggcttgggggag
ggcctggaggaggacccggctgcagccggagtccccggggagaagggtaagcccatgtcg
tacgaggagaagaggcagctgagtctggacatcaacaagctgcccggcgacaagctgggt
cgtgtggtccacatcatccagtccagagagccctcgctgaagaactccaaccccgacgag
atcgagatcgactttgagacgctcaagccgtccacgctgagagagctggagagatacgtg
tcgtcgtgcctccgcaagaacaagaagaaggttcctgtggcagagaagaccatggaggcc
atgacggccgccaagaccaaggccagctcctcctctgactcggacagcagcgactccagc
tcctcagacagtgatgaggagaagggagtggctcctaaacagaaacagaagaaaggccac
gggaccaacgaagggaagaagccccatctccaccatgccatgtctggagctggtccggtc
cctcagggccaccctcacgcccaggctcctgtcctgcagcccagcatccacctgaagcaa
cagcaacataacccctcccccgccacctacatggcccctcctctcccggtaacggtcacg
gcgttggagtcctcccagctgctggagaacacgtttgattcgctgccccacttcggccag
cagcccctcatgcacctgtcccagcaccaccactcctcgtcgcctgccgtgcccccccac
ctcaacgctcattccgcagcagggcccgtgtccccggagacgcacccatttctcaaccag
caccccatcctccccaaccctaacccagctttgcacaatgccttgccccagcagccgtct
cgacccagccacagggcagcagctctacctcccaaacccctccagcagcagcaaccagcg
ccccagccaaccctacaacaacaacaacaacaacaacaacaacttcagccacaagcccct
ccaccccagcaccacctcccgccccacatcctccaccccaccccccctcagtccctgcag
cagcggcccttgtccccccccaccctcacccctcagggcctgctgtcctcccagcccccc
cagatgctcctggaggacgatgaggaggtaattccacccttacctcagatgcatctctac
ctgcagcagggacagagccagggacagagccagggaagacctggccagcaaccacacaat
ccccagcagattatgcagtctctccaggttcgccaacaacagaaccaggctcccctcctg
cagtctgtacaggtccagacctcctctcttcagcccccccagctctcagtccagcctccc
cagccccagtccaagcccatccccccctcgcgccagatcctacccccgcaccaagtagcc
cgccacctgcagcagcatgcccagatgggttacccctcccaggggccggtggcacagcag
acgggtcactcagacaggcaggccactgcagggcaacacaaggggtcaatgcaggcctcg
gccaaagcacagcacatcatccagcaacagcaacatccctcccctcgacagatcaaggct
gatccatataacagtgggcacctgagggagaacccctcccccatcatgatgcattccccc
cacctcccccagtatccccccataacgcaccagtctccgccacacaacctgcagcccaag
aaagagcagcgtgcacccccggccctggtagccttgaaagaagagaagttgcctccctct
ccggtgatgagaggaggagagcccttcagcccagccatgagacaagaccctcacaaacac
ccagacagccacagcaagccctctctaccaggccacgcacagcagaagtcgatggacagc
tcaaggccggtcatccgttcctcagagcccagcggtcctccctcctcctcctcctccctg
ccagacaaggacaagttcaaacaggagcccaaaacgcccatcgcccccaaaaaggtacag
gatgtgaaactgaagaacatgggttcgtgggccagcctggcccagaagtccacgtcagcg
cccttgtctgcagtgaagtcgtctagcgacagctttgagcagttccgccgggccgcccgg
gagaaagaggagagagagaaggctcttaaggcccaggcagagcaggctgagagggacaaa
ctgcgccgggagcaggagaaactacggggtcgtgaccgggatgatgaggatatcctggag
cctcagcagcagtcaaggagggttcatgaggagcctcgaagcagacgtctggagcagcag
caacacatcccggccccccagccccagcagcaaccccaggcaccaaccccccaggcccag
gcccagcccgctgccctctcccagccgccacaggcccccacaccgccccagccctcagcc
caggaccagcagagggagctagcgcgacgccgcgagcaggagaggaggaggagagaagcg
atggcggcgaccatcgacatgaatttccaaagcgacctgatggccatctttgaggagaac
ttgttctga

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