Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421063
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Entry
139421063 CDS
T10872
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139421063
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139421063
09142 Cell motility
04820 Cytoskeleton in muscle cells
139421063
04810 Regulation of actin cytoskeleton
139421063
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139421063
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139421063
04515 Cell adhesion molecules [BR:
ocla04515
]
139421063
04090 CD molecules [BR:
ocla04090
]
139421063
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139421063
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139421063
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin alpha subunits
139421063
CD molecules [BR:
ocla04090
]
Proteins
139421063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
139421063
NCBI-ProteinID:
XP_071027665
LinkDB
All DBs
Position
12:complement(65553842..65569307)
Genome browser
AA seq
1057 aa
AA seq
DB search
MKKMEEHRIHRSIQMMGLLLFALPHYSDTLNLNLVNFTEFSGPEGSFFGFSADFYQFSNK
TISVVVGAPRANTSQPRVTEAGAVYLCPWAQTGGACTTMTFDTKGDEVYPHQNLVISSSK
SHQWFGATVRSSGNYIVACAPLFHWNVIDVGERDEAQNTPVGTCLVLNTLTGETVNFSPC
RDVMTEKNYKALKYTNDRRYCEVGFSSDITKEGRLLIGAPGGYYFQGQIISAGLPDIVDS
AKSQNAKPYVAGQTHSPETGGYDHYHGYSVATGEFTGDSIPDYVVGVPNDRNTAGSVKIY
NGNTPGFLGVKRTFLGSQVASYFGHSVAVTDINNDGIDDILIGAPLFMERVSGQQLQEVG
QVSVYLQRERSTFHSKPDQKLTGSQLYGRFGSTIAPLGDLDKDGFNDVAVGAPSSGVEGR
VFVYMGTSDGLSPQYTQVIESPFRSLGSPAQFGFTLRGATDIDSNGYPDLIVGAWGVNKI
AVYRAQAVVMAKTQLSLYPDFLNPDVKECQRPTTNEPVACFTVMMCISVSGHSIPEEIVL
DAELQLDKMKQTMARRTLLLQTNQPQEYFQLTIQRDVGVVCRNQTAYLRHESEFKDKLSP
IFISLNYSLSNSQEAMLHGQRAVVAQTRIILDCGEDNVCVPDLRLTAEAGTDRLLIGDDH
PALLVITAENRGEGAYETELEIRPPANTHYQSMVTDRKGFSRLICAQKKENQTVVMVCEL
GNPMKQGQKLQAGLFFSVGNLEEVESHVSFTLQIKSKNSQNPDSNVAHLRIDVRAEAALE
MRGGSSPPECVLPIAKWEQKEHPADLEEVGPLVEHVYELRNLGPSTVNARVQVEFPTHHH
GDVLLYVFANASEDFLTCHTDSPDIDPYQLVKTGNATVGKVYKVKQNEVAQQEPQRKETV
HVNCTSGDTCLRFVCEATGLERGWSAVVKVMSRLWVQTFLERPYENYVLHSTARFEVIDM
PSKIQPEELPSGQAETQTSVVWRAPDGEKEVPVWWIVVAVVSGLFLLALLALIFWKVGFF
NRNRPPCDDDDDDAEHLAGAGQSEYAEMPTNAEDKQA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatggaggaacaccggattcatagatcaatacaaatgatgggtctcctgcta
tttgctctcccacattactctgacaccttaaatctaaacctggttaacttcactgagttc
tctggccccgagggaagcttctttggcttctctgcagatttctatcagtttagcaacaaa
accatcagtgttgtggttggggcccctagagccaacaccagtcagccaagagtcactgag
gcaggggctgtgtatctctgtccctgggcacagacaggaggggcctgtactaccatgacc
tttgacacaaaaggtgatgaggtttatcctcaccagaacttagtgataagctcttcaaag
tcccaccagtggtttggtgctactgtgcgatcctccggaaactacattgtggcctgtgcc
cccctgttccactggaacgtaatagacgtgggggaacgtgacgaggcccagaacactcca
gtggggacctgcctagtgttgaatacactgacgggggaaacggtcaacttctccccctgc
agagacgtcatgactgaaaaaaattacaaagccctgaagtacactaacgacagacgatac
tgtgaagtgggatttagctccgacataacaaaggagggaaggctccttatcggtgctcct
ggaggctactattttcaaggtcagatcatcagtgcaggactgcctgacatcgtcgacagt
gccaagagccagaatgccaaaccttatgtggcaggacaaacccattcccctgagactggt
ggatacgatcattaccatgggtattctgtggccactggcgagttcactggagactcaata
ccagattatgtggttggagtgcctaatgatcgcaacacagctggctcagtcaaaatctat
aatggaaacacacctggctttttgggagttaaacgcacattcttaggctctcaggtggcc
tcttacttcggccacagcgttgcagtgactgatattaacaatgatggaatagacgacatc
ctaatcggggcgcccctcttcatggagcgtgtgtcgggccagcagttgcaggaggtgggc
caggtgagtgtgtacctgcagagagagcgctccaccttccactccaagccagaccagaag
ctgacaggttcccagttgtacggacgctttggcagcaccatcgcccccctcggtgacctg
gacaaggacggttttaacgatgttgctgtgggagccccatcctcgggcgttgaagggagg
gttttcgtctacatggggactagtgatggactgtctccccagtatacccaggtcatcgag
agtcccttccggtccctaggctctccagcacagtttggcttcaccctgcgaggggccact
gacattgattcaaatggctacccagatctaattgttggtgcatggggagtcaataagatt
gctgtgtacagggctcaagccgtggtgatggccaagacccaactctccctctaccctgac
ttcctgaacccagatgtgaaggagtgtcagcgccccaccaccaacgagcctgtggcctgc
ttcacagtcatgatgtgcattagtgtgtctggccacagcattccagaggagatagttcta
gatgcagagcttcagctggacaagatgaaacagacaatggccaggaggaccctattgctg
cagaccaatcagccccaagagtattttcagctaaccattcagagagatgtgggagtggtc
tgcaggaaccaaactgcttacctacggcatgagtcagagttcaaggacaagctcagcccc
atcttcatctccttgaactacagcctgtccaactcccaggaggccatgctgcatggccag
agagctgtggtcgcacagaccaggatcattctggactgcggagaggacaacgtctgtgtc
cctgacctgaggctgaccgctgaagcaggtactgaccgtcttctgataggggatgaccac
cctgccctgctggtcatcacagcagagaacagaggagagggggcctacgagaccgagctg
gagatacgcccaccagccaacacacactaccagagtatggtgactgacagaaagggcttc
agcaggttgatttgtgctcagaagaaggagaaccagacggtggtgatggtctgtgagctg
gggaaccctatgaagcagggccagaagctccaggctggtctgttcttcagcgtggggaac
ctggaggaggtggagagccacgtgtcattcacattacagatcaaaagcaagaacagccag
aaccctgacagtaacgtggcccatctgaggattgatgtccgcgctgaggcagctctggag
atgcgggggggctcctctccacctgagtgtgtcctgcccattgccaagtgggaacagaag
gagcatcctgctgacctagaggaagttggcccgctagtggaacacgtctatgagttgagg
aacctgggtccgagcacggtcaacgccagggtgcaggtagagttccctacccatcaccat
ggagacgtcctgctctatgtgttcgccaatgcttctgaggatttcctcacctgccacact
gactcccctgacatcgacccatatcagttggtgaagaccgggaatgctactgttggtaaa
gtgtataaggtcaaacagaatgaggtggcacagcaggagcctcagcgcaaagagaccgtt
cacgtgaactgcaccagtggagatacctgtctgaggtttgtgtgtgaggccacaggtctg
gagagaggctggagcgctgtggtgaaggtgatgtctcgactctgggtacagaccttcctg
gagaggccctatgagaattatgttctccactctacagcacgctttgaggttatagatatg
ccctccaagatccagcctgaagagctgccaagtggacaggctgagacccagaccagtgtg
gtgtggagggctcctgatggagagaaggaagtgccggtgtggtggattgttgtggctgtg
gtctctggcctcttcctccttgctctgctagctctgatcttctggaaggtggggttcttt
aatcgcaaccgtcccccgtgtgatgatgacgacgacgatgcagaacacctagctggggct
ggacagtcagaatacgctgagatgcccacaaacgcagaggacaagcaagcataa
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