Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421107
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Entry
139421107 CDS
T10872
Name
(RefSeq) junction plakoglobin-like
KO
K10056
junction plakoglobin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139421107
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139421107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139421107
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139421107
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
Adaptin_N
ARMC9_ARM
HEAT_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
139421107
NCBI-ProteinID:
XP_071027753
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Position
12:complement(68551254..68614740)
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AA seq
729 aa
AA seq
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MMSMQMNEAEGSVKVAEWQQTYYAHDSGIQSGATTVRDDEGTEYSAKKYAVTTTLVENPT
EVEAQYTLTRAQRVRAAMFPETLVEGEAVLSTQTDPGQQTNVQRLAEPSQLLKTAIVHLI
NYQDDAELATRAVPELTKLLADDDAVVVNKAAMIVNQLTRKEASRRVLMQSPQMVAAVVR
AMQNTGDMETARCAASVLHSLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLH
NLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANGG
PEGLVFIMRNYNYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGQHLTGSSQRLTQN
CLWTLRNLSDAATKQEGLDGLLQVLVGQLGSDDVNMLTCATGILSNLTCNNSRNKTLVTQ
CGGVEALIHAVLRAGEKEDVAEPAVCALRHLTSRHQDAELAQNAVRLHYGIPAIVKLLGQ
PHYWPVVKATVGLIRNLALCPVNQAPLRDAGAIPRLVNLLLKAHQDTQRHASSSQQTYQD
GVRMEEIVEGCTGALHILARDPVNRGEIASMQTIPLFVQLLYSYVENVKRVSAGVLCELA
LDKQSAEMIDAEGASAPLMELLHSNNEGIATYAAAVLFRISEDKSSDYRKRVSVELTHSL
FKHDPAAWEMAHNAVPMQAAYLADELDGGYPPYGYSDLGMGGMPLEAEMHEQYMPEMAYD
PRQAYPEPL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgcaaatgaacgaggcagagggctcggtgaaggtggccgagtggcagcag
acatactacgcccacgactccgggatccaatcaggtgccaccaccgtgcgagatgacgag
ggcacagagtacagcgccaagaagtatgccgtcaccaccacgttagtggaaaaccctaca
gaggtggaggcccagtacaccctgacgcgggcccagcgggtgagagcggccatgttccca
gagaccctagtggagggcgaggcggtgctgtccactcagactgacccgggtcagcagacc
aacgtccagcggctagctgagccctcgcagctcctcaagaccgccatcgtccacctcatt
aactaccaggatgacgccgagctggccactcgcgccgtgcccgagctcaccaagctgctg
gccgacgatgatgcggtggtggtcaacaaggcggccatgatcgtgaaccagctgacacgg
aaagaggcgtctcgccgggtgctgatgcagtccccccagatggtggcggcggtggtgcgg
gccatgcagaacacgggagacatggagacagcccgttgtgctgccagcgtcctccacagc
ctgtcccaccagagagagggcctgctcgccatcttcaagtccgggggcatccccgccctg
gtccgcatgctcagttctcccatggagtcagtgctgttctatgccatcaccaccctccac
aacctgctactgcaccaggagggagccaagatggcggtgcgcctggctgacggcctgcag
aggatggtgcccctgctgaaaaagagcaaccccaagttcctggccatcaccactgactgc
ctgcagctgctctcctatggaaaccaggagagcaagcttatcatcctagccaacgggggc
cctgaggggctggtcttcatcatgaggaactataattatgagaaactgctgtggaccacc
agccgtgtgctcaaagttctctctgtgtgccctagcaacaagcccgccatagtggaagct
gggggcatgcaggccctgggacagcacctgactggctccagccagcgcctcacacagaac
tgcctctggaccctaaggaacctgtctgatgctgccactaaacaggagggtctggacggc
ctgctgcaggtgttagtgggacagctgggttcggacgacgtcaacatgctgacgtgcgcc
acggggatcctgtccaacctcacctgcaacaactcccgcaacaagaccctggtcacgcag
tgcggcggcgtcgaggcgctcatccacgccgtgctgcgggcaggagaaaaggaggatgtg
gctgagcccgccgtctgcgccctgcgccacctgacgtcacgccaccaggacgctgagctg
gcccagaatgctgtgcggctgcattatggtattcctgccattgtcaagctgctggggcag
ccccactactggcctgtggtgaaggccacggttggtctgatccgtaacctggcgctgtgc
ccagtcaatcaggccccactgagggatgctggagccatcccccgattggtcaacctgctg
ctgaaggctcaccaggacacccagagacacgcctccagttctcagcagacgtaccaggat
ggtgttcgtatggaggagatagtggagggctgtacaggagccctgcacatcctggctaga
gaccccgtcaacaggggagagatcgccagcatgcagaccatcccactctttgtacagctg
ttgtactcgtatgtggagaacgtgaagcgtgtgtctgcgggggtgctgtgtgagctggcc
ctggacaagcagtctgcggagatgattgacgcagagggagcctccgccccgctcatggag
ctgctgcactccaacaacgagggcatcgccacctatgcagcagccgttctcttccgtatc
tcggaggacaagagttctgactacaggaagcgtgtgtccgtggagctcacccactcactg
ttcaaacacgaccctgcagcctgggagatggcccacaatgctgtacccatgcaagctgca
tacttggcggatgagctggatggaggctaccccccctatggctactctgacctgggcatg
ggcgggatgccactggaagcagagatgcatgagcagtacatgcctgagatggcctacgat
ccccgacaggcctacccagagcccctctaa
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