Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421111
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Entry
139421111 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139421111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139421111
04147 Exosome [BR:
ocla04147
]
139421111
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139421111
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139421111
Exosomal proteins of other body fluids (saliva and urine)
139421111
Exosomal proteins of colorectal cancer cells
139421111
Exosomal proteins of melanoma cells
139421111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TBCA_PH
DUF4140
GH43_C2
Prefoldin_2
ADIP
ATG16
Motif
Other DBs
NCBI-GeneID:
139421111
NCBI-ProteinID:
XP_071027760
LinkDB
All DBs
Position
12:68754124..68756689
Genome browser
AA seq
457 aa
AA seq
DB search
MSFSSSSFRSSSSRSMKGSSMGSSRMSMSGGGGGMSMSMSGGGSRISGIRAGSVYGGAGG
SGVRISSARASRSFSAGGGSFGGGAGFGGGSSFSMSGGGSDSHVIGNEKFCMQNLNDRLA
TYLAKVHTLEKANAELELKIRQFLEAKASPSAHDYGSSHVIIRDLQSKMQEAIRVNGAVH
LSIDNARLATEDFRMKYETELSMRQSVEADIAGLRCVLEELNMSKKDLSMQIEGLREELV
YLKRNHEEELLSMRAQMSGQVHVEVDAAPQEDLSKVMAEIREHYEGVAAKNNRELEGWFH
AKTEALNKEVAISTEVIQTSRSEISEVKRTLQSLEIELQSQISMKSSMENTLAETKNRFS
MQLSGYQMQVTSLEEQLVNLRADLQRQGQEYKMLLDIKTRLEMEIAEYRRLLDGEARSVS
SSSSSTSTRKVITVVEEVVDGKVVSSTQSSASSYARR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagcagcagcttcagatcctcctcaagcagatccatgaagggctcatct
atgggttcctcgcgtatgtccatgtctggtggtggtggcggcatgtccatgtccatgtct
ggtggaggcagccgcatcagtggcattagggccggcagcgtgtatgggggtgcaggtggc
tctggggtgcgcatctccagtgccagagcctccaggtccttctctgctggtggtggcagt
ttcggtggtggtgctggtttcggtggaggctccagcttcagtatgtctggtggaggaagt
gacagccatgtcatcggcaacgagaagttctgcatgcagaacctgaacgaccgtctggcc
acctacctggcgaaagttcacaccttggagaaggccaacgctgagctggagctgaagatc
cgccagttcctcgaggccaaggcctcccccagtgctcacgactatggttcatcccatgtc
atcatcagagacctccaatccaagatgcaggaagccatccgtgtgaatggtgctgtccat
ctaagcattgacaatgccaggcttgccactgaagacttcagaatgaagtatgagaccgag
ctgtccatgcgtcagtcagtggaagcagacatcgctgggctgaggtgtgttctggaagag
ctgaatatgtccaagaaggacctgagcatgcagattgaggggctgagagaggagttggtc
tacctcaagagaaaccacgaggaggagctgttgtccatgcgtgcccagatgagcggccag
gtccatgtggaggttgacgctgcaccacaggaagacctcagcaaagtcatggctgagatt
cgcgaacactatgagggtgtcgctgccaagaacaacagagaactggagggctggttccac
gccaagaccgaggcgctgaacaaggaggtcgcaatcagcacagaagttatccaaacgtcc
agatctgaaatctcagaagtcaaacgcacactgcagagtcttgaaatcgaactgcaatca
caaataagcatgaaatcatccatggaaaataccctcgcagagacaaagaaccgtttctcc
atgcagctgtcgggttatcagatgcaggtgacaagcttggaggaacagttggtaaatctc
agggctgacttgcaacgccagggccaggaatacaagatgttgctggacatcaagaccagg
ctggagatggaaatcgctgagtacaggagactgctggacggagaggccagaagtgtctcc
tcctcctcctcctctaccagcaccaggaaggtcatcacagtggtagaagaggtggtggat
gggaaagtggtctcctccacccaatcctcagcttcttcctatgcacgccgctga
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