Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421131
Help
Entry
139421131 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421131
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
Others
139421131
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139421131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
139421131
NCBI-ProteinID:
XP_071027828
LinkDB
All DBs
Position
12:complement(69602456..69647613)
Genome browser
AA seq
1822 aa
AA seq
DB search
MLASGRPMLGNLCAPMPAAMPPYPALPTRSEWCFQNPVGVDCSAAEPRCIWLAVLRGAPL
PSPPTMRPVPVGSRAQQHYHQPGAKGWRDGLSSAGDNPRPAMGAGGEGVGVGWQGPRTLL
LQKNSQGFGFTLRHFIVYPPESALHTSLKDEENGNGKGRSRLEPMDTIFVKNVKERGPAH
QAGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKGEDVLQLAYSQDAYLR
GNEPYTGGARNLPVPPPLCYAPHAKSQPPSGAPALMGQNQLDNWSRWAGSASPLSPLDNR
STVGSPASWQEGWGGHSSPPHRAEEIQCGVTGQQPTGQTRGRSYSSSSSSGGPLSSPLRV
HYVNHNATATTASSQPRKGSQAWASPPQPSPSRSHHCQQALSEWYYSQAAEQRQGRSGSM
HQRHRSYSQDRLCETGPGRHRRGPGGWPHSASQDTLMLLQQSGPGPHGDPSWTYRDWEGA
RDQSHHSSYGSRARSENLLVQYDRNGHSLEMLGSPRFERPAWLQQASQQAPRTEAYQRQG
NHYGVAPAPSMGRLAQPHHKTQSQSHPHTQPQPQQPAPQSRRLPTGQSLDDQPVGYRSYS
PSFNRKTGRIMQQPSFRDPSYLGPHLSWAPTPKTSPPEGVVPSVPSPLASTTPEPLDKAY
RPTNHERGAVEGQVEVVAQTQEVKLRQKPPTGRRNAHAMRHPHYTLPVDGTEPPVFPPDP
HNAAPAPRPSGDGAPHRTNGNLAPLSVEDDAMASIPFIDEPTSPSADLRARHVPASSVVS
SGMMAPAIVTSPASPTFTFPLTRLFSHDCSSIKSSRRSSYLLAITTERSKSCDEGLNTFR
DEGRVFSRLPKRVKSFFTDGSLDSLGAAEEVRSKRHSTSELGSISYSDIWREGWLHYKQI
LTEKGKKVGSGMRPWRRVFSVLRSHSLFLYKDKREAVLRGATLGGDADEEQPISIRGCLV
DIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLDWIKVISENSKTDNEELGFSRQALIS
KKLNDYRKQSPTGNKPDSSPRVSRAKPSFLLAKMENAAGAPRSPKPEGKDESSPPKSPWG
INIMKKSKKSGPKAFGVRLEDCQPAANNKFIPMIVEICCGLVEDMGLEYTGIYRVPGNNA
VVSSLQDQLNKGSDINPAEEKWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIDANRMEN
AGDRLKTMKKLIRDLPDHYYHTLKFLVGHLKTVADHCEKNKMEPRNLALVFGPTLVRTSE
DNMTDMVTHMPDRYKIVETLIQHYLWFFSEDLDKDEKTPVDTKDLVPAPNIDHLLSNIGR
TALLGEASDSTNSDSAKSKGSWGSKRDLTAKDFLTLSIMSAVTGRKRRNRHNGRLVGSST
DDDSEHEPIKASHLGAEEGEEAGLVVAGTDTAPRAEEEEEEDEEEEEESVVERVREKVEE
VIVPSMPCSSEKEKAGQTVMLLSEEEAVTAEVKGRVWRGPEDARSIVSGYSTLSTLGRSL
ASEGRCDEADDERSELVSETDNESGFASRSLTQERPEKHPPASITPTLTPPTPTHPPTAA
QRSFLYTHYKPHPVSPTTQHTTPTPSTHTQDPGERSEGGARSTTPSSSSSSTTHRLHPRP
SFNSHKLIQCDTLARKKLKDRGKTKTHSLDLPGPSGEEGAGAPGAQRNRSRTNPSSGSSQ
ESLRPPRPKEALPPSEAASFTPSGTGQGQGRGSLADQVRARLLGSADDLRIVGLRKPLSP
ETRRKRRAWRRHTVVVSPTESGDKRPALATNKFPMSLATSNQGKPQGSPLDHQELDPRHP
LPLGQNPPVTRRVPASRFHQYL
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgttggcatcgggtcggcccatgttgggtaatctctgtgcccccatgcccgcggctatg
cccccttaccctgctctaccaactaggtcagagtggtgcttccagaatcccgtaggagtg
gactgtagtgccgccgagcctcgctgtatctggttggcagtgctgcgtggtgcccccttg
ccctcgccccccaccatgaggccagtcccggtcggcagccgtgcccagcaacattatcac
cagcccggggcaaagggttggagagatgggctctcctcggccggtgacaaccctcggcct
gcgatgggggcgggaggagagggggtcggcgttggctggcagggtccccggacactacta
ctccagaagaactcacagggcttcggcttcacgctgcgccacttcatcgtctacccacca
gagtctgccctgcacaccagcctcaaggacgaggagaacgggaatggaaaggggagaagt
aggttggagccaatggacaccatatttgtcaagaatgtgaaagagcgaggtcccgctcac
caggctggcttgtgtacaggggatcggctggtgaaggtgaatggagagagtgtcctgggg
aaaacctactcccaggtgatcgccctcatacagaacagtgagagtgtgttggagctctct
ataatgccaaaaggtgaagacgtgctgcagctggcatactcccaggatgcctacctgagg
ggcaacgagccttacacagggggagcccggaaccttccggtacccccgcccctttgctac
gctccccacgccaagtcccagcctccctctggggccccggcccttatgggccagaaccag
ctggacaactggagccgctgggcaggctccgccagccctttgtcccccctggacaaccgc
tccaccgtgggcagcccggccagctggcaggaggggtggggcggacacagtagccccccc
cacagggcggaggagatccagtgcggtgtgaccgggcagcagcctacgggacagaccagg
ggccgctcctactcctcatcttcctcctcaggagggcccctcagcagccctctgcgtgtc
cactacgtcaaccacaatgccaccgccaccaccgcctcctctcagccccggaaaggcagc
caggcctgggccagccctccccagccgagccccagccgcagccatcactgccaacaggcc
ctgtctgagtggtactacagccaagctgctgagcagcgtcagggccgcagtggcagcatg
caccaacgccaccgcagctactctcaggacaggctgtgtgagacaggccccgggcgccac
cgacggggtccgggcggctggccccacagcgcctcccaggacaccctgatgctactgcaa
cagtcaggccccggcccccacggggacccttcttggacctacagagactgggagggggcc
cgggaccagagtcaccactcctcctacggcagcagagcccggtcggagaacctgctggta
cagtacgaccgcaatggccactcgctggagatgctggggtcaccccgtttcgagaggcca
gcctggctgcagcaggcctcacagcaagcacccagaactgaggcctatcagaggcagggg
aaccattacggtgttgcgccggccccttctatgggccgtctagcacagccgcaccacaaa
acccaatcacagtcccacccacatacccagccccagccccaacagccagccccccagagc
agacgtcttcccaccggacaaagcctggacgaccagccagtaggttaccgcagctacagc
ccctccttcaaccgcaagacaggccgtatcatgcagcaaccctccttcagggacccctcc
taccttggcccccacctcagctgggcccccacccccaaaaccagcccccctgagggtgtt
gtcccctcagttccatcccccctggcctccaccacccctgagccccttgacaaggcctac
cgccccaccaaccatgagagaggggcagtggaaggccaggtggaggtggtagctcagacc
caggaggtcaaactgagacagaaaccccccacggggcgaaggaacgcccacgccatgcgc
cacccccactacaccctgcctgtagatggcacagaaccccctgtgtttccccctgacccc
cacaacgctgcccccgcccctcgcccctcaggagatggtgccccgcaccgtaccaatggc
aacctggcccccctgtctgtagaggatgacgcaatggcctccattccctttatagatgag
ccgacgagccccagcgctgacctccgtgcccgccacgtgcccgcctcctctgtggtgtcc
agcggcatgatggctcccgccatcgtcaccagccccgcctcccccacctttaccttccct
ctaaccaggctcttctcacacgactgcagcagtattaaatccagtcgccgttcctcctat
cttctagccatcaccacggagcgctccaagtcatgtgacgagggactcaacaccttcaga
gatgagggccgcgtcttctcgaggctgccaaagagagtgaagagttttttcactgatggg
tctctggacagtctgggggcagcagaggaggtgcgctccaaacgccactccacctcagag
ctgggcagtatcagctacagtgacatatggagagagggatggctgcactacaaacagatc
ctcacggagaagggcaagaaggtgggcagcggcatgcgtccgtggaggcgggtcttctca
gtgttgcgctcccattcgctcttcctttacaaggacaagagggaggcggtcctgcggggc
gccactctgggaggcgatgccgacgaggagcagccaatcagcatccggggctgcctggtg
gacatagcgtacagcgagaccaagcgcaagcacgcactgcgtctgaccactcaggacttt
tgtgagtacctgctgcaggccgaggacagagaggacatgctggactggatcaaggtcatc
agcgagaacagcaagaccgacaatgaggagctgggattctcaagacaggctctgatcagt
aagaagctcaatgactacaggaaacagagtccaacaggcaacaagccggactcctctccc
agggtgtcccgtgccaagccttccttcctgctggccaagatggagaacgctgccggggcg
ccgcgctcacccaaacctgagggcaaagatgagagcagcccccctaagtcaccatggggg
atcaacatcatgaagaagtccaagaagtcagggcccaaggcttttggagtgcggctagaa
gactgccagcccgccgccaacaacaagtttatccctatgatcgtggagatctgctgtggg
ctggtggaggacatgggtctggagtacaccggcatctacagggtcccagggaacaacgca
gtggtgtccagccttcaggaccagctcaacaaggggtcggacatcaaccctgcagaggag
aaatggcaggacctgaacgtgatcagcagcttgctcaagtctttcttcaggaaacttccg
gagcccctcttcacagatgataagtacaatgacttcatcgacgctaaccggatggagaat
gccggggaccggctaaagaccatgaaaaaactgatccgtgacttaccagaccattactac
cacactctcaagttcctggttggccatctgaagacggtagctgaccactgtgagaaaaac
aagatggaacctcgtaacttggccctggtgttcgggcccacgctggtgcggacgtctgaa
gacaacatgacagacatggtgactcacatgcctgaccgctacaagatagtcgagacgctc
atccaacactatctctggtttttcagtgaggacctggacaaggatgagaagactccagta
gacacaaaggacctggtgcctgcccccaatatcgaccacttgctctccaacatcggcagg
accgctctgctaggggaggcgtcagactcgaccaacagtgactcagctaaatctaagggc
tcgtgggggtcaaagcgagacctcactgccaaggactttctgaccctgtccatcatgtcc
gccgtcaccggacgcaagcgcaggaatcgccacaacggccgcctcgtgggcagcagcaca
gacgacgactcggagcacgagccgatcaaagccagccacctgggggcggaggagggagaa
gaggcggggctggtggtggcaggaacagacaccgccccacgagcagaggaagaggaggag
gaagatgaggaggaagaagaagagtctgtagtagagagagtgagagagaaggtagaggag
gtgatagttcccagcatgccatgcagtagtgagaaagagaaagcagggcagacggtgatg
ctgctctctgaggaagaggcggtgacagcggaggtgaagggcagggtgtggcgggggcca
gaggatgctcgctctatcgtctccggttactccaccctttccacactggggcggagcctg
gcgtctgagggccggtgcgatgaagctgacgacgagcgcagcgagctggtgagcgagacg
gacaatgagagcggattcgcctcacgctcccttacccaggagagacctgagaaacacccc
cctgcatctattacacccaccctcacacccccaacccccacacatccccccacagcagca
caacgaagcttcctctacacacactacaaaccccaccctgtctcccctacgacccagcat
accacccccaccccctccacacatactcaggaccctggggagaggagcgagggtggtgca
cgatccaccaccccctcctcctcctcctcctccaccacccacagactacacccccgaccc
tccttcaactcccacaagctgatccagtgtgacacgctggccaggaagaagctaaaggac
agagggaagaccaagactcattctctggacctccctgggccttcaggagaggagggagct
ggggcgccaggggcccagaggaaccgatccaggaccaacccttcctcagggagcagccag
gagagcctacgtccaccccggccaaaagaagccctgccccccagtgaggctgcctctttc
acccccagcgggacagggcagggtcaggggcgagggtctctggctgaccaggtgcgtgca
cgcctgctgggctcggctgatgacctgcgcatcgtgggactgaggaagccactctccccg
gagacgaggaggaagagacgggcctggagaagacacactgtggtggtctcacctaccgag
tcgggcgacaagaggcctgcgctagccaccaacaagttccccatgtcgctggccacttcc
aaccagggcaaaccacagggatcacccctcgaccaccaggagcttgacccaagacaccct
cttcccctgggccagaatccccccgtcacacgccgagtacccgcctccaggttccatcag
tacctgtaa
DBGET
integrated database retrieval system
