Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421147
Help
Entry
139421147 CDS
T10872
Name
(RefSeq) synaptic vesicle membrane protein VAT-1 homolog
KO
K23167
synaptic vesicle membrane protein VAT-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139421147
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
139421147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADH_zinc_N_2
ADH_N
ADH_zinc_N
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
139421147
NCBI-ProteinID:
XP_071027852
LinkDB
All DBs
Position
12:complement(70004774..70050350)
Genome browser
AA seq
474 aa
AA seq
DB search
MSGDDAPAQQQNAEETKQDNKPSEEPKAESKPESPPVSSTEAAATPAATEKVPEEEQFTY
RSLVLSGYGGYDKVKLQVKKGKPALKAGEVMVRVKACGLNFADLLARQGLYDRLPSPPVT
PGMECSGEIEAVGEEVTDRKVGDKVLVLNRCGLWQEVAVVPATHTFLIPEGMTFEEAAAL
PVNYITAYMMLFDFGNLRPNQSILIHSAAGGVGIAATQLCQTVKDVTVFGTASASKHETI
SQGGVTHCIDYRTRDYVEEVRKISPKGLDIVLDPLGGSDTHKAYNLLKPMGKLITYGAAN
MLAGQKKNLLAVAKTWYHQFSIHTLSLIQNNKSVCGFHLGYLDGEVEVIQQAMTTILDLY
KQGKIKPRIDSTYHLEQVGDAMRRMQERNNIGKVILITEPMPEEEKKEEPKKEEKKEDKK
KEDKKKDDKKKDDSKKEDKKEEKKKEEPKKEEKNEEKNEEKKEEKKEEPKKEEK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgatgatgcacctgctcagcagcaaaacgccgaggaaacaaagcaagataat
aaacccagcgaggagccgaaagctgagtccaagccggagtccccaccagtcagttccacc
gaggcggcagccacaccggcggcgaccgagaaggtccccgaggaagagcagttcacctac
cgctctctggtcctttccggctacgggggctatgataaggtgaaactgcaggtgaagaag
gggaagccggcactcaaggccggagaagtcatggtgcgggtcaaggcatgcgggctgaac
tttgccgacctgctggcccggcagggtctgtacgaccggctgccgtccccacctgtcacg
ccagggatggagtgctccggggagatcgaggctgtgggagaagaggtgacggatagaaaa
gtgggtgacaaggtgctggtgctcaaccgctgtgggctgtggcaggaggtggccgtggtg
cccgctacccacacattcctcatcccagagggaatgacttttgaggaagccgccgccctc
cccgtcaactacatcaccgcctacatgatgctgtttgactttggcaacctgaggcccaac
cagagcatcctcattcactctgctgcaggtggggtgggcatcgcggccacccagctgtgt
cagacagtgaaggacgtgaccgtgtttgggacggcgtcggccagtaagcacgagaccatc
agccagggcggagtcacgcactgcattgactaccgtacacgggactacgtggaggaagtc
cgcaagatcagccccaaagggctggatattgtgctggatcctctgggaggctcagacacc
cacaaggcttacaacctgctgaagcccatgggcaagctcatcacctacggtgcagctaac
atgctagcaggccagaagaagaaccttctggcggtggctaagacctggtaccaccagttc
tccatccacacactcagcctcatccagaacaacaagtcagtgtgtggcttccacctgggc
tacctggatggagaggtggaggtgattcagcaggccatgaccaccatcctggacctctat
aaacagggcaagatcaaaccacgcatcgactccacctatcacctcgaacaggtgggcgat
gccatgcggagaatgcaggagagaaacaacatcggcaaggtgatcctcatcaccgagcct
atgccagaggaggagaagaaagaggagcctaagaaagaggagaagaaggaggacaagaag
aaggaggacaagaagaaagacgacaagaagaaggatgactccaagaaggaggacaagaaa
gaagagaagaagaaggaagagccgaagaaggaggagaaaaacgaggagaaaaacgaggag
aagaaagaggagaagaaggaggagcccaagaaagaagagaagtga
DBGET
integrated database retrieval system
