Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421199
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Entry
139421199 CDS
T10872
Name
(RefSeq) Golgi SNAP receptor complex member 2-like
KO
K08496
golgi SNAP receptor complex member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139421199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421199
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
139421199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
V-SNARE
Ran-binding
EzrA
DUF4371
Mononeg_mRNAcap
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
139421199
NCBI-ProteinID:
XP_071027943
LinkDB
All DBs
Position
12:72169114..72176385
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AA seq
212 aa
AA seq
DB search
METLYHQTNKQIQEVQSLMGRLENTDRQSVHLLENELQARIDQIFSHLERLEILASKEPP
NRRQNAKLRVDQLKYDVQHLQTALRNFQHRRYSRETQDREREELMSRTFTTNDSDTSIPI
DETLQLNSNLNNAHRGMDDLLGSGSSILTGLRDQRGTLKGTHKKMLDVANMLGLSNTVMR
LIEKRATQDKFIMIGGMLLTCVVMFLVVKYLG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattgtaccatcaaacaaataagcaaatacaggaggtgcagtcgctcatggga
cgcctggagaacacagatcgtcagtctgtccacttgttggagaacgagctgcaggccaga
atcgaccagatcttcagccatttggaacgtctggaaatcctggctagcaaagaaccgcca
aaccggcgtcagaacgccaaactgcgggtagaccagctgaagtatgatgttcagcacctc
cagacggcactgaggaacttccagcaccgtcgctactcacgagagacccaggaccgagag
agggaggagctcatgagtcgtaccttcaccaccaacgattcagacacctccatccccata
gacgagacgttgcagttaaactccaacctgaacaacgcacaccgaggcatggacgacctc
ctgggcagcggcagcagcatcctcaccggactccgggaccagaggggcacgctcaagggg
acccacaagaagatgctggatgtggccaacatgctgggtctgtccaacacggtgatgagg
ctgatcgagaagagggccacccaggataagttcatcatgattggagggatgctgctcacc
tgtgtggtcatgttcctggtggtcaagtacctgggctga
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