Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421289
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Entry
139421289 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421289
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139421289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
Glyco_hyd_101C
SH3_1
PH
PH_9
WW_TCERG1
SH3_9
Motif
Other DBs
NCBI-GeneID:
139421289
NCBI-ProteinID:
XP_071028121
LinkDB
All DBs
Position
12:75506926..75542452
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AA seq
1091 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYTGRDGGLVSIKPNERYILLAKTNDHWWHVRKNEQARPFYIP
AKYVKELPAEFPSPLDFADPPSPDLVPVPGPVPVPVPVPKHSVPDRAETRAGDEVTIRLR
SPKRHQKTEHRMSTFGVPLEFHDPSPRALKSGELNDSLPGLHSTVALEVPLTVPSPQANN
SAKHKKQLSLSSGVLFGSSLSVEEPLSLNPRAPSFSPADPLQRPSQAIPVERSLIPDAEV
TGGGIPHQEPLKEPECPLELEEGENEKSSVEPEDESKEDTENIYESILDLKLDESPIIVE
KAPTVSPAAVAAPTPVIIPTSPSPTQTQAENASPNTAVYANVTELKKNIPQSPPLEALSP
DLPLTQEGWQVHTDKDSGKEFYYRPATGQTTWADPRSTLPSTDMELPKEALAIPALSMAL
SPGLSPALSPALSPALSPALSPALFPALSPALSPALSPASSQGSNWEQVFDETTGRNYFY
NPTSGATSWGAPEPIAPSSPVTEPPMLKLPDRGPPPLPKEDYLTEDHEAPDTSSSVFPKD
ILPMPQAKLAIIPRAILDSVPAGWKRSVEADGKTVFTSERTQEQWLKSVDQEGKTYYYLR
DGSRSQWNLPAEIPGAASLSKVGNGVDQDSPLVLKNWRHTMGPAEFGPSQEDNRFFPTHR
RNVSDVTSEASSSGNSPETPRHTDRLGVRSRLSHLSTDSHHEHTHILEKAGILNKTKVAD
NGKRIRKNWSPSWTVLHGGILTFHKDPKSAPAGNSNKTNQITPEYTVELRGATVAWAPKD
KSSKKNVLELKTRHGCEYLVQYDTENIICDWHRIILDTVRQLDQDHLSEEEEEEPMEKSP
LASDRDKRTSSATKITPGISAESSDQGRVRTKLRKFLQKRPTLQSVKEKGYIRDNVFGCH
LDTLCHRENSTVPRFAEKCIRAVEIRGLDIDGIYRVSGNLAVIQRLRHKADHEENLDLED
GQWEEIHVITGALKLFLRELPEPLFPYSLFDKFIAAIKIQDYPQKVLYFRDLVRSLPLPN
HDTMHLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTESANITVYMVYQNQIVELI
LKEFETVFAPS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtacgagtacaca
ggccgtgacgggggcctggtgtccatcaagcccaacgaacgatacatcctgctggccaag
accaacgaccactggtggcacgtgaggaagaacgagcaagcaaggcctttctatatacct
gctaaatacgtcaaggagctccccgcagagttcccatccccgctggactttgctgaccca
cccagtcccgatttggtcccggttcctgggccggtgccagtgccagtcccagtcccaaag
cactccgtaccagaccgggcagaaacgagggcaggagatgaggtgactatccgtctccgc
tccccgaagagacatcagaagactgagcaccgcatgtccacatttggcgtacccttagaa
ttccacgacccgtctcccagggcattgaagagcggcgagctgaacgactctctgccgggc
cttcactccaccgttgcccttgaggtccccttaacagtgccctcgcctcaagccaacaat
agtgccaaacacaagaagcaattaagcctgagttccggtgtgctcttcggctcttccctg
tcggtggaggagcctctctccctgaacccccgagcccccagcttcagcccagctgacccc
ctccaacggccctcccaggccatcccagtggagaggtccctcattcctgatgccgaggtc
accggtggcgggattccccatcaggaacctctgaaagagccggaatgtcctctggaactg
gaggagggagaaaatgagaaatctagtgtggagcctgaggacgaatcgaaagaggacact
gagaatatttatgaatccatattggacctgaagctagatgagtcccctataatagtggag
aaggccccgacagtgagtcctgctgctgtggctgcacctacacctgttatcattcccact
tctccatctccaacacagacacaggcggagaatgccagccccaacactgctgtttacgcc
aacgtcaccgagctgaagaaaaacatcccacaatcccctccgttagaagctctgagtcct
gacttgccccttacccaggagggatggcaggtgcacactgacaaggacagtgggaaagag
ttctattaccgcccagccacgggccaaaccacttgggccgacccccgcagcaccctcccc
tccacagacatggagctgcccaaggaggcgttggctatcccagccctgtccatggccctt
tccccgggcctgtccccggccctgtccccagccctgtccccggccctgtccccggccctg
tccccggccctgttcccggccctgtccccagccctgtccccggccctctcaccagcctca
tcccagggttccaactgggaacaggtgtttgatgagaccaccggtcgaaactacttctat
aaccccacctctggggccacgtcctggggagctccggagcccatcgccccctcctctcct
gttactgagcctcccatgctgaagctcccagacagaggaccgccccctctcccaaaggaa
gactacctgacagaagaccacgaagctccagacacctcctcctcagtgttccccaaagac
atcctgcccatgccgcaagctaaactggccatcataccccgggccattctagacagtgtc
ccggcgggctggaagcgctccgtagaggcagatgggaagaccgtattcaccagcgaacgc
acacaggagcagtggctcaagtctgtggatcaagaaggaaagacatactactacctgaga
gacggctccagatcccagtggaaccttccagcagagatcccaggtgcagccagtctgtcc
aaggtggggaatggagtggatcaggacagcccgctggttctgaagaactggagacacaca
atgggcccagctgagtttggcccctcccaagaagacaacaggttctttccaacacatagg
agaaacgtttcggatgtcaccagtgaagcatccagctcaggcaactcccctgagacgcca
cgccatactgataggttgggagtacggagtagactgtcacatctgagcacagactcacat
catgagcatacacatatactagagaaggcagggatcctgaacaaaaccaaggtggctgac
aatgggaaaagaattaggaagaattggagtccgtcatggacagtgctgcatggaggcatt
ctcacgtttcacaaagacccaaaatctgcacccgcgggaaactctaacaagaccaatcag
atcaccccagagtacacagtggagctgcgtggagccactgtggcctgggcccccaaggac
aagtccagcaagaagaacgttctggagttgaaaacgcgtcatgggtgtgagtacctggtc
cagtatgacacagagaacatcatttgtgactggcacaggatcatactggacaccgtcaga
cagctggaccaagatcacttgtcggaagaggaagaggaggagcctatggagaaatctcca
cttgcttcagacagagacaagaggaccagctcagccactaaaattacgcctggcatcagt
gccgagtcatcagatcaggggcgtgtccgcaccaaactacgcaagttcctccagaagagg
cccacactgcagtcagtgaaggagaagggctacataagagataatgtgttcggttgtcat
ctggacacgctgtgccatcgagagaacagcactgtgcccaggtttgcggagaagtgcatc
agggcagtggagattagaggtctggacattgatgggatctacagagttagtgggaatcta
gctgtcattcagagactacgccacaaagcagatcatgaggaaaatctggacctagaggat
ggtcagtgggaggagattcatgtgatcacgggggcgctaaagctcttcctaagggagctg
cctgaacctctcttcccttacagcttattcgacaagtttatcgctgccatcaaaatccag
gactatcctcagaaggtgttgtacttccgtgacctggtgaggtcccttcccctgcccaac
cacgacaccatgcacctccttttcaaacacctcctcaaagtgattgagtttggggaaaag
aaccgtatgtcagtccagagtgtggccatcgtgtttggccctacgttactcaggccccag
actgagtcggccaacatcaccgtttacatggtctaccagaaccagattgtggagctcatc
ctcaaagagtttgagacagtatttgcccccagctga
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