Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421319
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Entry
139421319 CDS
T10872
Name
(RefSeq) protein Tob2-like
KO
K14443
protein Tob/BTG
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139421319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139421319
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139421319
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139421319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
139421319
NCBI-ProteinID:
XP_071028184
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All DBs
Position
12:complement(76349990..76356855)
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AA seq
404 aa
AA seq
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MQLEVKVALNFIVSYLYNKLPRRRADLFGEELERILLSRYEGHWYPEAPLRGSAFRCLHL
GAPRDPVVELAARRSGLDTEEVRANVPPELSVWIDPYEVSYQIGENGAVKVLYLEDPSGL
GGEGEMVEVVSGVSKGDMEVEEAKSLGFNPEAQVFVPIGAQISPVLLPSLSSSPTPLSAS
SCPVIFSYPSSSTPTNPTAHSNTSTPSPPSGALPYLPSQQPTTALPSTRLPLQPITFTTA
SFAATKFGSTKMKKCGGSGSAGGSGVGVPPPQRMLARSPTNISPPGLLKHKPLSVSLHSL
GAQIPSQLSPNAKEFVYPASPGPLYFDNDALPILPHSSPFQHPHPTLSHPSFEPFSSPPP
GPAVGIIGGSGEISYIEKPSFVEGIGGYNLQYPSQAFQPVVLAN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagctagaggtaaaggtagctctgaatttcattgtgtcctacctgtacaacaaactg
ccccgtcgtcgtgctgacctcttcggggaggagttggagcggatactgttgtcgcgctat
gaaggccactggtaccctgaagctcctctgcggggctctgccttccgctgcctgcaccta
ggggcccccagggacccagtggtggagctagctgccaggagaagtggactggacacagag
gaagtgcgtgccaatgtcccccctgagctgagtgtgtggatcgacccctatgaggtgtcc
taccaaatcggggagaatggagccgttaaggtcctgtacttggaggatccatctggttta
ggtggggaaggcgaaatggtggaagtagtaagtggagtgagtaaaggggacatggaggta
gaggaggccaagagcttaggtttcaaccctgaggcccaggtgtttgttccaattggagcc
cagatatctccagttctgcttccttccctctccagctcacccacacctctctcagcctca
tcatgcccagtgattttcagctatcccagctccagcacacccacgaacccaacggcccac
tctaacacatccacaccttcccctccaagtggggcactcccttacctcccctctcagcag
ccaacaaccgcactgcccagcacccgtctaccgctgcagcccatcaccttcaccacggcc
agttttgccgccacaaaatttggctccactaagatgaagaagtgtggtggttccggatcg
gctggcggctcgggtgtaggcgtgcccccgccacagaggatgctcgcccgttcccctacc
aacatctctccccctgggctgctgaaacacaagcccctctcagtctccctgcactccctg
ggggctcagatccccagccagctctcccctaatgccaaagagtttgtttacccggcatcc
ccagggcccctatactttgacaacgatgctctgcccatactaccacactcaagccccttc
cagcaccctcaccccaccctctcccacccctcatttgagccattctccagccccccacct
ggtccagctgttggcatcattggtggtagcggtgagatttcttacattgagaagccctca
tttgtggagggtataggggggtataacctgcaatatcccagccaggccttccagccggtg
gtgctggccaactaa
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