Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421355
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Entry
139421355 CDS
T10872
Name
(RefSeq) BAR/IMD domain-containing adapter protein 2-like isoform X1
KO
K05627
BAI1-associated protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139421355
09142 Cell motility
04810 Regulation of actin cytoskeleton
139421355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421355
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139421355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
SH3_9
SH3_1
SH3_2
WH2
BAR
Motif
Other DBs
NCBI-GeneID:
139421355
NCBI-ProteinID:
XP_071028249
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All DBs
Position
2:12117802..12134009
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AA seq
702 aa
AA seq
DB search
MSHSDEVNKMTENVYKGILDQFNPSLKNFVTMGKHYEKALTGVTVAAKGYFDGLVKLGEL
ASDSQGSKELGDTLFQMAEVHRQIQVQLEDVLKLFHSELLSQLEQKLELDIKYLTATLKK
YQSERKSKSESIECCQSQLKKLRRKSQGSRHPNKYGDREMQYVELMSRRQAELDTLVAVG
YRSALTEERRRYCFLVDRQCSVTKLLINYHCKVRELLSQKLSSWQQSCSQPTRLPERALN
LLRHTAPQGSGASGIAELLRHAKLGAAQPEQRLSVQEVPPLLNGGSKQQRPIPSSSQSDI
PPPQHSPGPQTFRSLAATGGAIGGSGAGSPQQISTPISVSASPNANNNTSANAITTANTP
ITSSTSSTVGSSQAQQTSLLLATSTSSLSPSLIPSTVLSLSQGSPSYSSLQGLALPLSLS
APHSPPLPHSAPLSRAITPSLHHQGVLGGGNTPLRSHNPMLMKAAEMYGTSTLPLPRKPV
SEARVGGFMGSTLPRDRVLPLSSPSRVEAIFAHAPGGSEGSGVGGACLLHFLPGDALSLL
ISEPRDGWHYGQNERTGRKGWFPFSYTQPYPNTLDPLDSSSPLLSKVNSTSTGQLDKLVS
PGLPALTPESEEERSFPPQRVSTFRPRPYSMADSNQVSLRPKVRGEGVEWAGPPDRPALS
MLMQELSSDFASPPPSPTWTNPFAHVRLRKTVTNDRSAPIIE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcagacgaggtcaacaagatgacagaaaacgtgtataaggggattctggac
cagttcaaccccagtctgaagaactttgtgaccatggggaaacactatgagaaagccctg
acaggagtgacggtagcagccaagggatacttcgatggtctggtcaaactgggagaactg
gccagcgacagccaagggtccaaagaactgggagacacgttattccagatggccgaggtg
cacaggcagattcaggttcaactggaggacgtgttgaagctgttccattctgagctgctg
tcccagttggagcaaaagctggagttggacattaaatatcttaccgccacgttgaagaaa
tatcagagtgagcgcaagtcgaagtcggaatctatcgagtgctgccaatcacagctcaag
aagctgcgcaggaagagccagggcagtcgccaccccaacaagtatggagatagggagatg
cagtatgtggagctaatgagtcgtcgtcaggctgagctggacacgctggttgctgtgggt
taccgctcggcgctgacggaggagaggagacgatactgcttccttgtggaccgccagtgt
tcagtcaccaagctgctcatcaactaccactgcaaggtgagagagctcctgtcacagaag
ctgtcctcatggcaacagtcatgctcccagccaaccagactacctgaacgggcgctcaac
ctgctgcgtcacaccgcccctcagggctctggggcatctgggatagctgagctcctccga
catgccaagctgggcgctgcacagccagaacagaggctgtcagtacaggaggtgcctccc
ttgttgaatggtggctccaagcagcagagacccatcccctcttcttcccagagtgacatc
ccccctccccaacattcccccggaccccagaccttccgctccctcgctgccactggaggg
gctattggagggagtggggcaggctcccctcagcagatcagcacgcctattagtgtctca
gctagccccaatgctaacaacaacacaagtgctaatgctatcactactgctaacactccc
atcacttcatccacctcctccacggttggctccagccaagcccagcagacctctcttctc
ctggccaccagcacctccagcctttctcctagtctgatcccctccactgtgctttctctc
agccagggctccccatcctactcctccctacagggcctggccctgccgttgtccctcagt
gcccctcacagtcctccactaccccacagtgcacctctttccagagccataaccccctcg
ctgcatcaccagggagtgctaggaggagggaacacaccattgcggtcccataatcccatg
ctgatgaaggcagcagagatgtatggaacgtctacactgccgttgccaaggaaaccagtc
agcgaggcccgggtgggagggtttatgggttccactctgcccagagaccgagttctccct
ctctccagcccgtctcgtgtggaagccatatttgcccacgctcctgggggttcagagggc
agtggagtgggcggggcctgcttacttcacttcctgccaggcgacgctctcagcctcctc
atctctgagcccagagacgggtggcactatggtcagaacgaacggacgggacggaaaggc
tggttccctttctcctacactcaaccctaccccaacaccttggatcccctcgacagcagc
tccccgctcctctctaaggtcaacagtaccagtacgggtcagttagacaagctggtctcc
cctggcctgcctgccctgacccctgagtctgaggaggagcgctcgttcccccctcagagg
gtcagcaccttccgcccgcgcccatacagcatggccgactccaaccaggtcagcctgagg
ccgaaggtcagaggtgaaggggtagagtgggcagggccccctgaccgaccggctctgtca
atgctgatgcaagagctctcctcagacttcgcctctcctccaccctccccaacctggacc
aacccatttgcccatgtccggctcagaaagacggtgaccaacgatcgctctgcacccatc
atcgaatag
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