Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421397
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Entry
139421397 CDS
T10872
Name
(RefSeq) cysteine protease atg4da-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139421397
04136 Autophagy - other
139421397
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139421397
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421397
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139421397
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
139421397
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
139421397
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139421397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
139421397
NCBI-ProteinID:
XP_071028357
LinkDB
All DBs
Position
12:78462784..78471076
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AA seq
462 aa
AA seq
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MNPSSPCEGQSPEGDPPDDWFHLSTMSLGTQGSDGSRDDPEEPEERGRLKSKLVSAWNNV
KYGWSFKSKARFSKTSPLTMLGQSYLLSHGVERECFRKAFATLLWLTYRRGFPQLDGSSL
TTDSGWGCMLRSGQMLLAQGLLLHLLPPGWTWLSANHVSKDDMGVQESRSLGPEVTKKGR
RKSIVSFLESRTEVTHRRVVSWFGDHPIAPFGLHQLVEQGTSAGKKAGDWYGPSIVAHIL
RKAVDAASAEVSNLTVYVAQDCTVYIDDVVRLCERPLSEGSTGPSPAWKSVIILVPVRLG
GEVLNTTYIKCVKNLLRLECCIGIIGGKPKHSLFFVGYQDEQLLYLDPHYSQSTVDITQD
NFPLESFHCKCPRKISFSRMDPSCTIGFYAKSQKEFELLCSTVSTALSSSTEKYPIFTIA
EGQGQEDESDAPPNSITHILTKDKARLRRTNNSNSMDEFVLL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagttctccctgtgagggccagagccctgagggtgaccctccagatgattgg
ttccacctttccaccatgtctctgggaactcagggctctgatgggagccgggatgaccca
gaggaacctgaggagagaggcagactcaagtccaagttggtgtcggcatggaacaatgtc
aaatatggctggtcgttcaagtcaaaggcccgcttcagcaaaacctctcctctgaccatg
cttggacagtcttatctgctcagtcatggagtggagagggagtgctttcgcaaggccttt
gccactctgctgtggctgacgtacaggcggggcttcccacagctggatggttcctctctg
accacagacagtgggtggggctgcatgctgcgcagtggacagatgctgctggcacagggg
ctgctgctacacctgctgccgccaggctggacctggctctctgccaaccatgtgtccaaa
gatgacatgggggtacaggagtctcgctccttgggtccagaggtgactaagaagggaagg
aggaagagcatagtgtccttcctggagagccggactgaggtcactcacagacgggtggtg
tcctggtttggggaccatcccatcgccccgttcgggctgcaccagctggtggaacagggc
acaagcgcagggaagaaggcaggggactggtacggcccctccatcgtagcacacattctt
cgtaaggctgttgacgcagcatcagcagaggtgtccaatctgacagtgtatgtagcacag
gactgcactgtgtacatagatgatgtggttaggctgtgtgagagacctctatctgagggc
tccacaggacccagtccagcctggaagtctgtcatcatcctggtccctgtgcgcctggga
ggagaagtcctcaacaccacctacatcaaatgtgtcaaaaatctcctgaggttagaatgc
tgcattggaatcattggtggcaaacccaagcactctctgttcttcgttgggtaccaagac
gaacagctgctgtacttggacccccactacagccagtccacagtagatatcacacaggat
aacttccccttagagtcgtttcactgtaagtgtcccaggaagatctccttcagtcgcatg
gatcccagctgcactataggcttctatgccaagagccagaaggaatttgagttactgtgt
tcaactgttagcacggctctctcatcatcaacagaaaagtaccccatcttcaccattgca
gagggtcagggacaggaggatgagagtgatgcacccccaaactctatcacccacatcctg
accaaggacaaggcgaggctgcgaaggaccaataacagcaacagcatggatgagtttgtg
ttattgtga
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