Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421429
Help
Entry
139421429 CDS
T10872
Name
(RefSeq) xylosyltransferase 2-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139421429
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139421429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139421429
NCBI-ProteinID:
XP_071028423
LinkDB
All DBs
Position
12:79813918..79826970
Genome browser
AA seq
877 aa
AA seq
DB search
MVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KREAVAWERQNALSGRSGARWNSRLERTGATAASALQRGSKHRGKHTIRVKMPLGQGVAV
DGVPPHDPSSSRNFTDTRGGGEGAARLPPPAMPGEPGSVEGAPQAPSSDFVPKCDIMGKD
ALSALHRAGSRQCRQEIANIVCQHQAGQLMPRALPQFCPLHGFSSPVQTADELDNDPSKV
ENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIAQQYPNVR
ATPWRMVTIWGGASLLKAYLHSMQDLLSMLDWNWDFFINLSATDFPTRTNDELVAFLSQH
RDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRRF
VEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCK
CQYKHIVDWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESTVNQEAIDILDTHLYGHYAP
GTVAIKAYWESLFERADGVGSLSDVALTAYSSFFRLGLRSLDSSQTSLETCRYEPIGYPV
SVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERLKNLEVGT
EWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDIGVDVDAE
YTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGRKPLRQEEDSWLHAGPPG
NLYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTGDLCSTLP
SPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgtcagagtgcagaagctcctccgacgatacaaactagcgattgccgcc
gcgttaacgattcttctaattcaagggctagtagtatggagtctgagaagtctcgaagag
ggcgaggcggagaggaaaacgcggcggtccaagctacctgaccacaacagccaggacccc
aaaagggaggcagtggcttgggagagacagaacgccttgtctgggaggagcggggcccga
tggaacagcaggctggagaggacgggggccacggctgccagtgccctccagaggggctcc
aagcaccgggggaagcacaccatcagggtgaagatgcccctgggccagggtgtagcagtt
gatggcgttcccccccatgacccctccagtagccgtaacttcactgatacccggggcgga
ggggagggggcggccagactaccccctccagccatgccaggggaaccgggcagcgtggag
ggggcgccccaagcccccagcagcgactttgtgcccaagtgtgacatcatgggcaaggac
gccctgtcggccctgcaccgcgcaggctcgcggcagtgccggcaggagatcgccaacatt
gtgtgccagcatcaggccgggcagctcatgccaagggcactgcctcagttctgcccgctg
cacggtttttccagcccggtccagacagctgatgagctggacaatgacccgtccaaggtg
gagaacccggtcagggtagccttcgttctggtggtccacggccgggccatcaggcagctc
aaacgcctcatcaaagccatataccaccgagaccacttctactacatccacgtggacaag
cgttccaactacctgcatcgggaggtgcagcagatcgcccagcagtaccccaatgtgcgt
gccacgccctggcgcatggtgaccatctggggcggtgccagcctgctgaaggcctacctg
cacagcatgcaggacctgctctccatgctggactggaattgggacttcttcatcaacctc
agtgccactgacttccccaccaggaccaacgatgaactggtggcttttctgtcacagcac
agagaccagaacttcctcaagtcacatgggcgggagaacgcgaggttcataaagaagcag
ggtctggaccggctgttccatgagtgtgacaaccacatgtggcggctgggtgagcggacc
atcccagagggcctggaggtgtctgggggctctgactggttctccctcaccaggcgcttc
gtagagtatgtcatcaactcccaggatgagctggtggcgggcctgaaacagttctacacc
tacgccctgctccccgctgagtccttcttccacacagtgctggggaacagtcacatgtgt
gactctctggtggacaacaacctgcgtgttaccaactggaacaggaagctgggctgtaag
tgccagtacaaacacatagtggactggtgcggctgctctcccaacgacttcaaaccacag
gacctcgtcaggatacagcaactgacccggcccacgttctttgcccgaaagtttgagtcc
acggtgaaccaagaggccatagacatcctggacacccacctgtatggacactacgcccca
gggacagtggccatcaaggcctattgggagagcctgtttgagcgggcggacggggttggc
tccctcagtgacgtggccctcacggcctactcttccttcttccgcctgggcctcaggagc
ctggatagcagccagaccagcctggagacctgcaggtatgagccaataggctacccggtg
tcggtgcacctctatttctacgacgagcgtttccagggctacttggtacgtcaggaggtg
cagaaagtggggtcaagggtcagggaaacggtggaggtgtgggccgtgcctcaggccacc
atgcagctggagaacaacctcagggagtttgagaggctcaagaacctggaggtgggcaca
gagtgggaccccaaggagagaatcttccggaactttggcggtgtgatcgggccgctggac
gagccggtggcggtacagaagtgggttcgggggcccaacctcactgccaccattgtgtgg
atcgaccccgcccagacggtggcggcgtcttatgacatcggtgtggatgtggacgcagag
tacacacagtacaagcccccgctacagcggccgctccgccccggggcctggacagtcagg
gtgctgaggctgtgggagcgcgtggccgaggctcgcttcctcgtcatgcccctggccttc
aaaggacgaaaaccactacgccaagaggaggacagctggctgcacgcggggccaccaggc
aacctgtacctggagcagggcttccagcagctgagatctgttctgaagctgcccccacag
gagcccgccctgcaggaggcccagcagagggcccagctggtgggcaaacccctggaagcc
tgggtggaccgcactgtgggggccttctgggtgaccggggatctgtgctccaccctgcct
tccccgggcccctgcccttccctgggcccctgtaccaagtccacctggagctccctcgcc
ccagaccctaagtcagaacttggccctgtcaaaggtgatggccgaatcaggtag
DBGET
integrated database retrieval system
