Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421507
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Entry
139421507 CDS
T10872
Name
(RefSeq) excitatory amino acid transporter 2-like isoform X1
KO
K05613
solute carrier family 1 (glial high affinity glutamate transporter), member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139421507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139421507
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
139421507
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
139421507
NCBI-ProteinID:
XP_071028567
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Position
12:complement(81950492..81986967)
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AA seq
663 aa
AA seq
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MTQGLGFCLFFLSLYRSILSSLHCVSPGVLLWLDGRRHTADRMTNQQPVHQSNKAHYDEA
LPPIVGAGVLDLLEPKLPNSFLGTYCGFLIRNSLLVLTILGVIAGSLFGMLLRYVSITDP
NTLMLVSFPGDILMRMLKMLILPLIISSLITGLAGLDARSSGRMGSRAMVYYMSTTVIAA
ILGVILVLGIHPGNPKLRSSQEQDTAPKNQEVSSLDAFLDLIRNLFPENLVQACFQQVQT
VAKKVSVMPPNQTEPVIVSKKKLEFKWGMNVLGLIGFFITFGMCMGKMGEKGKLMSEFFN
ILNEIIMKMVGMIMWYSPVGIASLISGKIAAIGDLEVVARQLGMYMVTVIVGLMIHGGII
LPLIFFSITRKSPFTFYSGIFQAWITALGTASSAGTLPVTFRCLEENLKIDKRVTRFVLP
IGATINMDGTALYEAVAAIFIAQMNDINLDAGQIVTVSMTATLASVGAASIPSAGLVTML
LILTAVGLPTQDISLLIAVDWLLDRLRTSINVVGDSFGAGIVDHLSRAELAEIDAELLSP
EDEEFIPPPPVLTEIDLVDPKRPPELPPRSPRPPKLNHHGHSNLSQIYSITNSPRSVRSP
SPHSVRSPSPRSNCSHSNSPRPSAFRTHSPRILRRTEPGYCALPSHDNQVGRVTATTSPR
AQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggactgggattttgcctattctttctctctctctaccgctccatcctttcc
tcccttcattgtgtctctcccggtgtcttgctctggttggatgggagacgacacacagca
gacaggatgacgaatcagcagccagtccaccagtctaacaaggcccattatgatgaggca
ctgccacccattgttggagctggagtgttggacttgttggaacccaaacttcccaatagt
ttcttgggaacctactgtggcttcctcatccgaaactcactgctcgtcctcactatactg
ggtgtcatagcggggtcgctgtttgggatgctgctgcggtatgtttccattacagacccc
aacaccctgatgctggtgtcctttcctggagacatcctcatgaggatgctgaagatgctc
atcttgcccctcatcatctccagcctcatcacaggtctggctggtctggatgctcgttcc
agtgggaggatgggctccagggccatggtctactacatgtccactacggtcatagctgcc
atcctgggggtcatcctggtcctggggatccacccgggaaaccccaaactcaggagcagt
caggagcaggacacggcccccaagaaccaggaggtcagcagtctggacgccttcctggac
ctcatcaggaacctgttccctgaaaacctggtgcaggcctgcttccaacaggttcaaaca
gtggcaaagaaagtgtcagtgatgcccccgaaccagacagaacctgtcatagtcagcaag
aagaaactggagttcaaatggggcatgaatgttctgggtttaattgggttcttcatcaca
tttggaatgtgcatggggaagatgggagagaaggggaagctcatgtcagagttcttcaac
atcctcaatgagatcatcatgaagatggtgggcatgatcatgtggtactctccagttggt
atcgcctctctgatctcagggaagatagcagccatcggggacctggaggtggtggctaga
cagctgggcatgtacatggtgactgtcatagtgggcctaatgatccacgggggaattatc
ctgccactcatcttcttctccatcacaaggaagagccccttcaccttctactccgggatc
ttccaggcctggatcactgccctgggcaccgccagcagtgcgggaacgttacctgtcaca
tttcgctgtctggaggagaatctgaagatcgataagcgcgtgacgcgtttcgtactgccc
atcggtgccaccatcaacatggacggtacagccctgtacgaggcggtggcagccatcttc
atcgctcagatgaatgacatcaacctggacgcaggacagatcgttaccgtcagtatgaca
gccaccctggccagtgtgggagcggccagtattcccagcgcaggcctggtcaccatgctg
ttgatccttacagctgtgggcctgcccacccaggacatcagcctgctcatcgctgtcgac
tggctgcttgacagactgcgtacctcaatcaacgtggtgggcgactcgtttggtgctggg
attgtggaccacctgtccagggcagagctagctgagattgacgccgagctcctctcccct
gaggatgaggagttcatccccccgccccctgtcctcaccgagatagacctggtggacccc
aagagacctcccgagttacccccacgctccccccgcccgcccaaactcaaccaccacggc
cactccaacctgtcacagatctactccatcaccaactctccccgctccgtccgctctccg
tccccccattctgtccgctctccctccccgcgctccaactgttcccactccaactcccca
cggccctctgccttccgtacccattccccacgcatcctccgcagaacagagcctggctac
tgcgccctgccaagccacgacaatcaggtaggcagggttacagctaccactagtcctagg
gctcaatcctaa
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