Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421571
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Entry
139421571 CDS
T10872
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421571
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Others
139421571
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
TPR-S
TPR_2
TPR_19
Motif
Other DBs
NCBI-GeneID:
139421571
NCBI-ProteinID:
XP_071028699
LinkDB
All DBs
Position
12:86380725..86388562
Genome browser
AA seq
1557 aa
AA seq
DB search
MTCSVYKMEWNKLPCGEWTESHVSSWLESIGVKEKYILKLYEEEVTGPALIELQEKYLRD
TIEMKGGQIQLMLHKRDELLKPVPQKTKAVSSTQRDTSHVESSAVFTQESKDKVSRSSEK
SESRPVSIPNECEPKSGGASLPLCDFRKFDDIEKEFRYVKNTVLPPETGIEDIIVPCHEY
KSLENAHKLEPQKLKVKVASEVLRFACACMNMRSNGTIHFGVMDKVKGIYKHGEIIGIPV
ENQDLFVDALDYIEKSFRGSTHQCDARKCIRNPKFIEVIDKEASETTWIIEYDVVPKAKM
VKDKLYSVTIPKFSEKSNKVIYEEKATYHRVGANTPRISEDGLIHFIQDLRDKDQQREEA
ELSDNQTASDCREDQKRKLSILLTCGKKYMDDSLFYIIVTNKLKQEHLENINFLTHMNIF
CVFDFDPDSKTSGLCEKYKEHHATNLHFLHDYANDSGVKTTDFINRLKLFDKPSWIFCNG
RSDYLGDEKPCDEKTWMKTKKKLLKRAVSVICNDILPKGSFVVVFLLMSQVEQPIVDTFH
EFYAEMNGHDDLAIISESKENYKKWSSLAQVSCSMAALKEISIVEMPLSHVDATIQTIQP
TVSRPTRRLPVFNKGLCFLKPVEEDEINSLDIVSVDQCDNTKVEIMDQDKINTIEKYFYQ
GGKIDWMNLWLADKNLCGEVIKRDAYKETNEILENIVQGSRVKRPIETVNICHHPGSGGS
TVARQILWSWRTKLRCAVVKQSKEFTTVCEHAVRLREYEEKDKNSCLPVLLLLEDCNGDY
LDDLRREIGNAIATKKISSSVLCFILLICKMSHDPERMCRALPSQTVAVTHKLTDGEKTL
FSRKLEKLKLDFKPDFILTFVLMSEGFKPSYIEGFVKNLLDKIDHSSLITRLMRFVALLN
CYIHDSYISVSHCEASLGIDMHMDKIRYHAFLDCLSEQARLVFIHLSPFKGESPLHISSI
RIIHPLVAKEILKQLSTTLPQSMIAMDLLQDKVLMNHRFGKDEFWKFIQVLFIRRNKKSR
GDPKDSSFSPLIEHVSTETGGIQTAVDLLKAAYTSLGKDPFVAQQLARLLYTNTRFEEAL
RWAKEAKEILPYDTFVLDTLGQVYKRWFYHMHDTLDKQELVPEKVTDIIDTALKGISAFR
ASEKTPLKKTVSLNSSYYGEVDVGCRLLQLISSVDVFSTKGGNSELMKYLLTDYKPQAVT
NPWRSFHSQLKGMQKSIYHALECISEDLSYFQTDISDEEEELDTREPEQVHNPRKWLTRT
SAVYAGFFCNVSDLGNPMPDNIDAEIATNPEIANPFQRQMKIYKLGGGNVTSILSLLYDQ
KTERSAKKLEAIIGMYPENLKRNDLDQTELVNFIFCQIALACALPGSSKLLLPQQLQDLS
MRFNTEGKNMSTASALFLLLLLLWPEEPSRENTNPAHSQVLMSAIDALQRLYELKIQHVP
PRKSRIATHFFLGKARGLYKIVHKGLIEKHIKGNLSERRMKWLGGEVWTTPEVVRLLKRV
EGWTENGHLFVQGTTKGSKIRVIPRYSASLPNANENVTFYLGFSFDGVLAFDIQVLD
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgacatgcagtgtctataagatggagtggaacaaattgccatgtggcgaatggacagaa
tcccatgtgagctcctggttagaatccattggagtgaaagagaagtacattctgaaactg
tacgaagaggaggttacaggacctgcactaattgagttacaggaaaagtatctacgcgat
acaattgaaatgaaaggcggccaaatccaactaatgctgcacaaacgagatgaacttttg
aagccagtaccacaaaaaacaaaagccgtcagtagcacacagagagataccagccatgtt
gaatctagtgctgtgttcacacaagaatctaaagacaaagtttcaagatccagtgaaaaa
agtgaaagtagacccgtttccataccaaatgaatgtgaaccaaaatcgggcggggcatct
ttgccgctttgtgactttcgaaaatttgatgacattgaaaaagaattcagatatgtaaaa
aatacagtacttccaccagagaccggaattgaagacattattgttccatgccatgaatac
aagtcactggaaaatgcccacaaattggaaccacaaaaactcaaggtcaaagttgcaagt
gaggtgctcagatttgcatgtgcatgcatgaatatgcggtccaatggcacaatacacttt
ggggttatggataaagttaaaggaatctacaaacatggtgaaatcataggaataccagtt
gaaaaccaagatttatttgtggatgcattggattacattgaaaagagcttcagaggatca
acgcatcagtgtgatgccaggaaatgcataaggaacccaaagttcattgaggtaattgac
aaggaggccagtgaaacaacatggatcattgaatatgatgttgtccccaaggcaaaaatg
gtaaaagacaaactgtacagtgtcactattccaaagttcagcgaaaaatccaacaaagta
atctatgaggagaaagccacctaccacagagtaggggctaacacaccccgcatatcagag
gatggcctaattcatttcattcaagacctgagggacaaagatcaacagagagaggaggct
gaactctcagacaaccaaacagcttctgactgtagagaggatcagaagagaaaactctcc
atcctcctcacatgtggaaaaaagtacatggatgactcactgttctacatcatcgtgaca
aacaaacttaaacaagaacatcttgagaacatcaacttcttgactcacatgaatatattt
tgtgtgtttgactttgacccagattctaagacatcgggtctatgtgagaaatataaagag
caccatgccacaaaccttcatttcctgcatgactatgctaatgatagtggggtgaagacc
actgacttcataaaccgtttgaagctctttgataaaccaagctggattttctgcaatggg
cgaagcgattaccttggagatgagaaaccttgtgatgaaaaaacctggatgaaaaccaaa
aaaaagctactgaaaagggcagtgtccgtcatctgcaatgacatccttcctaaagggtca
tttgtggtggttttcttgctcatgtctcaggtcgaacagccaattgttgatacattccat
gaattctatgcagaaatgaatggtcatgacgatttggctatcatttcagagtctaaagag
aactacaaaaagtggtcaagccttgcccaggtatcttgtagcatggctgcactcaaagag
atcagtattgttgaaatgccactgagtcatgttgatgccactattcaaactattcagcct
acagttagtcgacccacaaggcgcttaccagtcttcaacaaaggcttgtgcttcttaaag
ccagttgaagaggatgagattaattctttggacatagtcagtgttgaccagtgtgataac
acaaaggtggagataatggaccaagacaaaatcaacaccattgaaaagtatttctatcaa
ggtgggaagatagactggatgaatttgtggcttgcagacaaaaatctatgtggggaggtc
atcaagcgagacgcatacaaagaaacaaatgaaattctggagaacattgtacagggtagt
cgagtcaaaagacccatcgagactgtgaatatatgtcaccatcctggcagtggtgggagt
acagttgcacgacagatcctctggagttggaggacaaaattgcgatgtgcagttgtcaaa
caatcaaaagaattcacaactgtgtgtgaacatgcagtgcgtctacgggaatatgaagaa
aaggacaaaaacagctgtctaccggtactgttgctgttggaagattgcaatggagattat
ctggatgaccttaggcgggaaataggcaacgctattgcaacaaaaaaaataagttcctct
gtcctatgttttatcctgctcatctgcaaaatgtctcatgatccagagagaatgtgccga
gcattgccgtctcagaccgtcgctgtgacacacaaactgacagatggagagaagactctc
ttctcaaggaaactggagaaactaaagctggactttaaacccgacttcattctcacattt
gtactgatgagtgagggctttaaaccaagctacattgagggatttgtgaaaaatctgctg
gacaaaattgatcattcatctcttatcactcggcttatgagatttgtagcattgttgaac
tgttacattcatgactcctacatatctgtgtcacactgtgaggcttcccttggcatagat
atgcacatggataaaatccgttaccatgcatttctggactgtctcagcgaacaagctaga
cttgttttcatacacctttcacctttcaaaggagaaagtccattacacatctcgtccata
cggataattcatccactggtggcaaaggaaattctgaagcaactctctacaaccttgcct
caaagcatgatcgcaatggatctactacaggacaaagtactaatgaaccataggtttggc
aaggatgaattttggaagttcatccaagttctcttcatcagacgtaacaaaaaaagcaga
ggagatcctaaagacagttcattctctcctctgattgaacatgtcagcactgaaacaggg
ggcattcaaacagctgttgatcttttgaaagcagcttacacatctttaggaaaagatcca
tttgttgcccagcagcttgcacgtctgctttacacaaacacaagatttgaggaagcccta
cgttgggctaaagaggcaaaagaaatcctgccatatgatacatttgtccttgacacatta
ggacaggtgtacaagcggtggttttatcacatgcatgacacccttgacaagcaagaatta
gtgcctgaaaaggttactgacatcattgacactgctctgaaaggaatttctgcattccgt
gcctcagaaaaaacacccttaaaaaagacagtcagtctgaacagctcctactatggggag
gtggatgttggatgtagactgcttcaactcatatcatcagttgatgttttttcaaccaaa
ggtggaaattctgagttgatgaaatatttgctgactgactacaaaccacaggcagttaca
aatccttggcggagtttccacagccagttgaaaggaatgcaaaagagtatttaccatgct
cttgagtgcatttctgaagacctcagttactttcagacagacattagtgacgaggaagag
gaacttgacacaagagagcctgaacaagtacacaatccaaggaaatggctaacaaggacg
agtgctgtgtatgctggctttttttgtaatgtttctgatctaggcaacccaatgcctgac
aacattgatgctgaaatagccactaatcctgaaatagccaacccattccaaagacaaatg
aaaatttacaagctaggaggaggaaacgtcacgtccatcctgtcattactctatgatcag
aagacagagagatctgctaaaaagctggaggcaataattggcatgtatccagaaaacctc
aaaaggaatgaccttgaccagacagaacttgtcaatttcatattttgtcagatagctctt
gcttgtgctttacctggctcatcaaagttacttttacctcaacaactccaagatctcagc
atgagatttaacacagagggaaaaaacatgtcaacagctagtgctctctttcttctctta
cttctgctctggccagaggagccaagcagagagaacactaatccagctcatagccaagtc
ctaatgtcagcaattgatgcccttcagagactttatgagctcaaaattcaacatgttcct
ccaaggaagagtagaatagcgacccacttctttcttggaaaggcaaggggtctatacaag
attgtccacaagggtctgattgaaaagcacataaaaggaaatctcagtgaaagaagaatg
aagtggctcggaggtgaggtgtggacaacccccgaggttgtacgattgctgaaacgtgtt
gaagggtggacagaaaatggacacctgtttgttcagggtacaaccaaagggagcaagatc
agggtcattccacggtattcagcctctctaccaaatgcaaacgaaaatgtcactttctac
ctaggcttttcttttgacggggtgcttgcttttgacattcaagttttggactaa
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