Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421575
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Entry
139421575 CDS
T10872
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate-like isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla04144
Endocytosis
ocla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139421575
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139421575
04145 Phagocytosis
139421575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421575
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
139421575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
ELMO_ARM
UIM
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
139421575
NCBI-ProteinID:
XP_071028705
LinkDB
All DBs
Position
12:complement(86921094..86955642)
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AA seq
782 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLMDKNPHV
ALYGLEVLESVVKNCGQTVHDEVACKTTMEELKDLLKTEPNVRNKILYLIQAWAHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCHELLNNHPSLSPPPRKAEGGKPVGTST
SVAPGPAELPPEYLTSPLSQQSQVVVQETVPPKRDEAALQEEEELQLAIALSQSEAEEKE
RMRQKNSYGVYPKADPTPVTSSAPPVNSLYSSPVNSSAPSAEDVDPELARYLNRTYWEKK
QEEARKSPTPSAPAPVPLATEPLPISQPQPVETVAPLPAQVVMAPPPVNIVEQQYQNGES
EENHDAFLKALQNAVTTFLNRMKSNHMRGRSITNDSAVLSLFQSINTMHPQLLDILNQLD
EKRLYYEGLQDKLAQVRDARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLEIMRQKK
QEYLEMQRQLAIQRLQEQEKERQMRLEQQKHTIQMRAQMPAFPMPYPQMQSLPPNVAGGV
VYGQPGGPPSYPGTFSPSGSVEGSPMHNVYMNQPGPGQYQAMPPDPNMYMYQPAGTNGQP
APPGQAPPTTSPAYSNYQPTPTQGYQQNVVSQAQSLPPMSQPPPTNGMSYVAYPPPYAMQ
SMMAALPGQDPNMPPQQPYMQGPGQQPMYQQMAPPGGPQQQVQQQQPPQVHPGSEAQLIS
FD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggtggtggtacatttgagaggcttcttgataaagcaaccagtcagctgctg
ctggagacagactgggagtccatcctgcagatctgtgatctcattcgtcaaggagacaca
caggcgaagtatgccatcggagccattaagaagaagctgatggataagaacccgcatgtg
gccctttatggtcttgaggtgttggagtcagtggtgaagaactgtggtcagacggtccat
gatgaggtggcctgtaagaccaccatggaggagctgaaggatctactgaagacggagccc
aacgtgaggaataagatcctttacctgatccaggcctgggcccacgccttccgcaacgag
cccaaatacaaggtggttcaggacacgtaccagatcatgaaggtggagggtcacgtgttt
ccagagttcaaggagagtgacgccatgtttgctgcagagagagctccagattgggtggat
gcggaggagtgtcatcgctgccgggttcagtttggagtgatgactagaaagcaccactgt
agagcctgtggtcagatcttctgtgggaagtgttcctccaagtactccaccatccccaag
tttggcatcgagaaggaagtgcgtgtgtgtgagccctgccacgagctgctcaacaaccac
ccttccctctctcccccgcctaggaaagctgaagggggtaaacccgtcgggacatccacg
tccgtggccccaggcccggcagagctgcccccagagtacctgaccagccccctgtcccag
cagtctcaggtagtggtccaggaaacagtgccgcccaaacgggacgaggcggccctgcag
gaggaggaggagcttcagctggccatcgccctatcacagagcgaggctgaggagaaggag
aggatgagacagaagaactcgtacggggtctaccccaaagctgaccccaccccagtcacc
tcctcagccccgcccgtcaactcactctactcctctcctgtgaactcctctgctccctca
gctgaagatgtcgaccctgagctggctcgctacctgaacagaacgtactgggagaagaaa
caggaagaggcacgcaagagtcccaccccctctgcccctgcccccgtaccattggctact
gagcccctgccaatcagccagccccagccagtggaaactgtcgcaccactcccagcacaa
gtcgtcatggccccgcctccagtcaacatagtggagcagcagtatcagaacggtgagtcg
gaggagaaccacgatgcgttcctgaaggctctgcagaacgcggtcaccaccttcctgaac
cgtatgaagagtaaccacatgcgtggtcgcagcatcaccaacgacagcgccgtgctctcc
ctcttccagtccatcaacaccatgcacccccagctactggacatcctcaatcagctggac
gagaagagactgtactacgagggtctgcaggacaagctggcccaggtgcgtgatgcgaga
gccgccctgaacgccctacgagacgagcacagagagaagctgcgtcgtgctgccgaggag
gcggagagacagagacagatccagctggcccagaaactagagatcatgagacagaagaaa
caggagtacctggagatgcagcgtcagctggccatccagcggctccaggagcaggagaag
gagagacagatgaggctggagcaacagaaacacaccatccagatgagagcccagatgcct
gccttccccatgccctacccacagatgcagtctttgccccccaacgtggcaggaggggtg
gtgtacgggcagccggggggaccccccagttacccaggcacctttagcccctcagggtca
gtggaggggtcgcccatgcacaacgtctacatgaaccagcctggaccaggacagtaccag
gccatgcctccagaccccaacatgtacatgtaccagcctgcaggaaccaatgggcagcct
gcaccccctggccaggccccgcccactactagccccgcctactctaactaccagcccaca
cccacacagggataccagcagaacgtggtgtcccaggcccagtctctgccccccatgtcc
cagcctcctcccactaacggtatgtcctacgtggcctaccctccaccctacgccatgcag
agtatgatggcagccctacctgggcaggaccccaacatgcccccacaacaaccctacatg
cagggcccaggacaacagcccatgtaccaacagatggctccccctggtggcccgcagcag
caggttcagcagcagcagcctccgcaggtccatccaggcagcgaggcacagctcatctcc
ttcgactga
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