Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421581
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Entry
139421581 CDS
T10872
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139421581
04020 Calcium signaling pathway
139421581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139421581
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139421581
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
139421581
NCBI-ProteinID:
XP_071028724
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All DBs
Position
12:87222136..87343187
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AA seq
2152 aa
AA seq
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MVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFF
IFGIIGVQLWAGLLRNRCYLEENFTLSSGLTLPAPYYQPEEDDERPFICSLAQDNGIMSC
GDVPARREGGRTCCLDREDAYHRQSLGLIPEPLVNSSASAVGLCINWNQYYTRCHTGHNN
PHKGAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFIFLIIIGSFFMINL
CLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASLHEPGDCYEELFQLVCHMLRKARRR
SVALYNQLRGRPLPPPPTRGRGRGGGRGGGEGGGSANGGERHHLRQPRQSPCPHQSKLDP
VHSSQPLGNSIALAVPQNTEDCPQCAAALSLREGAGAVGCSANGEEEEGAVEETDREENH
LEEKAEEGEGVKKKRKRRSCFGHCKDMWDEMRKKLWGIVESKYFNRGIMIAILINTISMG
IEHHNQPEELTNVLEISNIVFTSMFTLEMILKLTAFGFFAYLRNPYNIFDGIIVIISVCE
IIGQSDGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPCA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDRSSCNFDENSDKLKDSLHL
SDPKICTLTPNGHLDLSPMPTGLYTADRLTFALGSRKNSVISLGRANLEGRANLEGRALC
RGSSSLYHNWGRPASQTQAMWGRRSSWNSLGRPSRALGLGLGVGGGGSLRSRSPHATHPA
EQESLLSPPAPPPHLTHPPPLLALNFVPRRDRRALSLELPELLQVPGTPLASMLPYPRKK
SFSSGLVGGGAGGEHQDCNGKAPSAQLQLQLQLPPHPHPHPQLLTEVFPQVNTRKDREDL
DDDIDYSLCFRIQKMMEVYRPEWCETREDWSVFLFSPQNRFRRVCQSIIAYKMFDYVVLA
FIFSNCITVALERPKIMQGSLERVFLTISNYVFTAIFVAEMTLKVVSMGLYIGEQAYLKS
SWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLI
TSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDCLQANYKWVHHK
YNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVINNSPWMLLYFISFLLIVSF
FVLNMFVGVVVENFHKCRQNQEVEEAKRREDKRRRRMEKKRRDAQKIPYYASYSPLRLWI
HTLCTTYYLDLFITFIICINVITMSLEHYSQPRSLDLVLKYCNYFFTSTFVLETLLKLTA
FGFRRFFKDRWNQLDLAIVLLSVMGITLEEIDYSASLPINPTIIRIMRVLRIARVLKLLK
MAKGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHAT
FENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDYGPDYSCNPSLQFISPMYFVSFVLTA
QFVLINVVVAVLMKHLDDSNKEAKEEAEMDAEIELELATGALCCMGPEGVCAGGKKGGGA
GGGAGGGGGGVDRGMGVPGSSSGGNMHHHVATTHPGTLQDPNNRDPYSPAQESQWLDSVS
LLIKDSFEGEMRMIDNLSGSVFHHYSSTSSPVWKDCKSHPQLEQIRLAEIEQASLRSDQM
SDKSSSPALPDDLSLDDQSVHQLQVREGKEERGSDSQGSEEAGGGGDSLTQAQTGGSRHC
RAHSSVAEEGAPLLVEVGVHQRHKTPSHHSPGGTSCSSTKAGEGSDEGGRGGGRVGAASA
SGSPALIRLPAEFFHPVGAAALPAPPRARVGRPSRGLRLTSPASWSALRSQGAHSRVLCT
QYPSHSDSSLAKGSSDGSLQTTLEEGLSFSVSPPQDLVSPLPPLPLLCPSLPEDPTSCPA
GQTLRPRPSPSSGPALTLQATRGHQRSQSSGRGSISPGYTREDSMDPVPCDLEDLGIGIS
LSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPASLAPSGVKKCNSTGSLNQGARRGEGRQ
ILGLELDHQGFLANPWGESGGGRGEEGQLGEAPDLKGKSSSQTTVGSCSKNR
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtactcgttggacctgcagaacatcaacctctcagccattaggacagtcagg
gtcctcagacccctcaaagccatcaacagagtacccagtatgcgtatcctggtgaatctc
ctcctggacacactgcccatgctgggaaacgtcctcctgctttgtttcttcgtcttcttc
atcttcggcatcatcggggtgcagctgtgggcgggattactgaggaaccgatgctacctc
gaagaaaacttcaccctttcgtcaggtctgaccctacccgccccttactaccagccggag
gaggatgacgagcgccccttcatctgctctctggcccaggataacgggatcatgtcgtgt
ggtgacgtcccggcccggagggaggggggaaggacctgctgtctggacagggaggatgcc
taccaccgccagtccttggggctcatccctgaaccactagtcaacagttcagccagtgca
gtgggtctctgtatcaactggaaccagtactatactagatgccatactggacataataat
ccacacaagggggcgatcaacttcgataacatcgtatacgcctggattgttatcttccag
gtgatcaccctggaaggctgggtagagatcatgtactatgtaatggatgctcactccttc
tacaacttcatctacttcatcttcctcatcatcattggctcgttcttcatgatcaaccta
tgtctggtggtcatcgccacccagttcagtgagaccaagcagcgcgagcaccagctgatg
caggagcagcgggcccagtgcctgtcctcctctaccctggccagcctgcatgaaccgggg
gactgctacgaagagctcttccagctggtctgccacatgctgcgcaaggcccgcaggagg
tctgtagccctgtataaccaactgagaggaaggcctctgccaccaccgcccactagaggg
agaggaagaggaggaggaagaggaggaggggaaggaggagggagtgcgaacggaggggaa
aggcatcacctgaggcagccacgccaatctccctgtcctcaccaaagcaagctggaccca
gtccacagctcccaacccctgggcaactccatcgccctggccgtccctcaaaacacagag
gactgccctcagtgcgctgcggcactgtcactcagggagggggcgggagctgtgggctgc
tcggccaatggggaggaggaggagggggctgtggaggagacggacagggaggagaaccac
ttggaggagaaagcggaagaaggggagggagttaagaagaagaggaagaggaggtcgtgt
tttggacactgtaaggacatgtgggatgagatgaggaagaaactttggggcatcgtggag
agcaaatacttcaatagaggaatcatgatcgctattctcatcaatactatcagcatgggg
atagaacatcacaaccagccggaggagctgactaacgtgttggagatcagtaacattgtg
ttcaccagtatgttcaccctggaaatgatcctcaagctgaccgcctttggcttcttcgcc
tacctgaggaacccctacaacatcttcgacggcatcatcgtcatcatcagtgtgtgtgag
atcataggtcagtctgatggaggtctgtctgtcctgaggaccttcagactgttgagggtg
atcaagctggtgcgcttcatgccagcgctacgcagacagctggtggtgctgatgaagacc
atggacaacgtggccaccttctgcatgctcctcatgcttttcatattcatcttcagcatc
ctggggatgcacatctttggctgtaagttcagtctgaagacagagactggagacactgtt
cctgacaggaagaactttgactctctactgtgggccattgtcactgtgtttcagattctg
actcaggaagactggaacatggtactgtataatggaatggcctccacctctccctgtgct
gctctctactttgtggctctaatgacctttggcaactacgtcctcttcaacctgctggtg
gccatcttggtagagggctttcaggctgagggggatgccaaccggtcgtactccgaagac
gacaggtcctcatgtaactttgacgagaactctgacaagctgaaggactctcttcatctc
tctgaccctaagatctgcaccctaacccccaacggtcacctggacctgtccccaatgccc
acgggtctgtacacggccgacaggctcactttcgctctgggctcacgcaaaaacagtgtc
atctctctgggcagggctaacctggagggcagggctaacctggagggcagggctctgtgt
cgggggagcagctccctgtaccacaactggggccgccctgcctcccagacccaggcaatg
tggggccggcggtccagctggaacagccttggtcgcccctcccgagccttgggcctggga
ttgggggtaggaggagggggtagcctgcgctcccgcagcccccatgccacccacccggcc
gagcaggagtccctcctctccccccctgcccctcctccgcacctcacccaccctcctccc
ctcctggccctaaactttgtcccgcggcgggaccgccgggcgctgtccttggagctgccg
gagctcctccaggtcccggggacccctctggcgtcaatgctgccttaccccaggaagaag
agcttctccagtgggttggttggtggaggggctgggggagagcaccaggactgcaatggg
aaggccccatcagcccagctccagcttcaacttcagctaccgccacatccacatccacat
ccacagctactgacagaggtgttccctcaggtcaacacacgcaaggacagagaggacctg
gacgatgacatcgactatagtctgtgtttccgtatccagaagatgatggaggtgtacagg
ccagagtggtgtgagaccagagaggactggtctgtcttcctcttctctcctcagaacagg
ttcaggcgggtatgccagtccatcatagcctacaagatgtttgactatgtggtgctagcg
ttcatcttctccaactgcatcaccgtggctctggagagacccaagatcatgcagggcagc
ctggaaagagtcttcctaaccatctccaactacgtcttcacagccatctttgtagcagag
atgacgctcaaggtggtgtctatgggcctgtatataggggaacaggcatatctgaaaagc
agctggaacgtgttggacggcttcctggtctttgtgtcgttgattgacattgtggtgtca
atggcgggcggggctaagattctgggggtgctgagggttctcagattgctccgcacactg
cgccccctcagggtgatcagtcgagccccaggtctgaagctggtagtggagactctaata
acgtctctgaaacctataggaaacattgtccttatctgctgtgctttcttcatcatattt
ggtatcctgggggtgcagctgttcaaagggaagttcttctactgctttggccccgacgtc
aagaacatcaccaacaagtctgactgtctgcaggccaactacaaatgggttcatcacaag
tacaactttgacaacctgggacaggctctgatgtccctgtttgtgctggcttcaaaggac
ggttgggtcaacatcatgtaccatggcctggatgctgtaggggtggaccaacagccagtg
atcaacaacagtccatggatgctcctctacttcatctccttcctcctcatcgtcagtttc
ttcgttctgaacatgtttgtgggcgtggtagtggagaacttccacaagtgccgtcagaac
caggaagtggaagaggctaaaaggagagaggataaacgacggagacgcatggagaagaag
aggagggacgcccagaagatcccctactatgccagctacagccccctccgcctgtggatc
cacactctgtgtaccacctactacctggacctcttcatcaccttcatcatctgtatcaac
gtcatcaccatgtcactggaacactacagccagccacgatctctggatctagtgttgaag
tactgtaactatttcttcacatccacctttgtactggagaccctcctgaagctcaccgca
tttggcttccgacgcttctttaaagacaggtggaatcagttggatctggccatcgtgttg
ctgtcagtgatgggcatcactctggaggagatcgactacagcgcttctctccccatcaac
cctaccatcatacgcatcatgagggtgttgaggatcgcacgagttctgaagctgctgaag
atggctaaaggaatgagagctctgctggatacggtggtccaagccctaccacaggtgggg
aacctgggcctgctcttcatgctcctgttcttcatctatgcagcactgggggttgagctg
tttggagaactggtgtgtaacgaggactacccatgtgaggggatgagccgccatgctacc
tttgagaactttggcatggccttcctcactctgttccaggtctccactggggacaactgg
aatgggatcatgaaggacacgttgagggagtgccctccggactacgggcctgactactcc
tgcaaccccagcctgcagttcatctctcccatgtactttgtgtcctttgtgttgacggcc
cagttcgtcctgattaacgtggtggtggcggtgttgatgaagcacctggacgactccaac
aaggaggccaaggaggaggcggagatggacgctgagattgagctggagctggccacgggg
gccctatgctgcatggggccggagggagtctgtgcaggagggaaaaaagggggaggagca
gggggaggagcagggggaggtggaggaggagtggatagagggatgggagtcccaggcagt
tcctccggggggaatatgcatcatcacgtggcaacgacgcatccaggaacactgcaagat
ccgaacaatcgtgatccctactctcctgcacaggagagtcagtggctggacagtgtgtct
ctgctgattaaggactcatttgaaggagagatgcggatgattgacaacctctctggatct
gtcttccatcactactcttctacctcttctcctgtctggaaggactgtaagagccaccca
caactagagcagatccggctggcagagatagagcaggcatctctgaggtcagaccaaatg
tcagacaagtcgtcgtctccggccctacctgatgacctcagcctggacgaccagagtgtc
caccagctgcaggtgcgggagggaaaggaggagaggggcagtgactcccagggctcagag
gaggctggcggaggaggggactccttgacccaggcccagacaggggggtcgaggcactgc
agggcccacagttcagtagccgaggagggggctccactcctggtggaggtgggggtccat
cagagacacaagaccccatcccaccacagccctggtggcacctcctgcagtagcacaaag
gcaggagaaggatcagatgagggaggaagaggaggaggaagagtaggagcggccagtgcc
tctggttctcctgctcttatccgtctgccagcggagttcttccaccccgtgggagcagcg
gccctgccggcgccccccagggccagagtagggcggccctcacggggcctcagactcacc
tccccggcctcctggtccgccctgcgctcccaaggagcccacagccgggtgctctgcacg
cagtacccgtcccatagtgactcgtctttggccaaggggagctccgatggcagcctccag
accaccctagaggaaggactcagcttcagtgtttcgccccctcaagacctggtgtccccc
ctccctcctctccccctgctctgcccctcgctccctgaggaccccaccagctgcccagca
ggccagactctgagaccgcggcccagcccctcgtcaggccctgccctcaccctccaggcc
actcggggccaccagcgtagccagagcagcggcaggggtagcatcagccccggctacacc
cgggaagactccatggaccccgttccatgtgacctggaggacctgggcatcgggatcagt
ttgtctatcggggggtgtggctccagccaggcgggcaacagcgaacacttgtcggagacg
ctaagcagtctgtcgctcacatcgttgctctcgcccgcctccctggcaccctcgggggtg
aagaaatgcaacagcactgggagcttaaatcagggggcgaggaggggggaggggagacag
atcctagggttggagttggaccaccagggcttcctggccaacccttggggagagagtggg
ggaggcagaggagaggagggacagttgggagaggcgccggacctcaaggggaaaagctca
agccaaacaacagtagggtcctgtagtaaaaacagatga
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