Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421590
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Entry
139421590 CDS
T10872
Name
(RefSeq) medium-chain acyl-CoA ligase ACSF2, mitochondrial-like
KO
K23617
medium-chain acyl-CoA ligase, mitochondrial [EC:
6.2.1.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139421590
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
139421590
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
139421590
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Gene cluster
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
139421590
NCBI-ProteinID:
XP_071028737
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All DBs
Position
12:88039484..88061672
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AA seq
621 aa
AA seq
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MSAVWISSSLLRSRATRLRQLSVFSRRAVLQPVQVVSSLQKTWTPGNPTLCCRSLHVDSP
PMVPGQSFSYVHGASSVSLLSQTVGQSLQAAADRWPHREALVFVQDGVRKTFSQFQQDVD
QAAAGLLALGLKRGDRLGVWGPNTYHWILFQFATAKAGIILVSINPAYQLKELEFTLGKV
QCNAVVCPNQFKTQRFCDTLRQICPEMDTAESGVFRSSRLPDLRMVIVTDSRQTGTVHVE
DVMQAGSRQHHQELQDLQTKLSFDDPINIQFTSGTTGNPKGATLSHHNIVNNAYFVGLRL
GFNWKPIRACVPVPLYHCIGSVIGGMCMALHGITLVFPSAGYDSRANLEAIQNERCNFLY
GTPTMYIDMLGQPDLHNYDLSSVESGFTGGSLCPPEVMRKLRTDMNVKDMIIGYGTTENS
PAAFVGYPRDNEELKTETVGCILNHAEAKVVDVSSGEVVPLGDPGELLIRAYSVMLEYWD
DPDKTSEAIAKDRWYRTGDIASLDRFGYCRIVGRIKDMIIRGGENIYPAEIEKFLHTHPN
VQEAQVIGVRDERLGEQVCACIRLKEGLDCSREEIRNFCKGQISHFKIPHYVVFVDSYPL
TASGKVQKIKLREEMEKKLGL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggtgtggatcagctcctcgctactgaggtccagggcaactcgcctcagacag
ctcagtgtgttctctagaagggctgtgttacaacctgtacaggtggtctcctcactacag
aagacatggacacctgggaacccaaccttgtgctgtagatccctccatgtggacagtccc
cccatggtcccagggcagagcttcagctacgtccatggggcctcctcagtgtccctgctg
agccagacggtgggtcagagtttgcaggcggcagctgaccgctggccccacagagaggcc
ctggtgttcgtgcaggatggagtccgtaagaccttctcccagtttcagcaggacgttgac
caggccgctgcaggtctcctggccctgggtctgaagagaggggacagactaggagtctgg
gggcccaacacataccactggatcctgtttcagttcgccacagccaaggctggcatcata
ctggtgtcgataaacccagcctatcagctgaaggagctggagttcaccctggggaaggtg
cagtgtaatgctgtggtgtgtcccaaccagtttaagacccagaggttctgtgacacgctg
agacagatctgcccagagatggacacagcagagtcaggggtcttcaggagctccagacta
ccagacctgcgtatggtgattgtgacagacagcagacagacagggactgtacatgtagag
gatgtgatgcaggctggaagcagacagcaccaccaggagctgcaggacctgcagaccaaa
ctgtccttcgacgaccccatcaacatacagttcacatccggaacaacaggaaatcctaaa
ggtgccaccctctcccaccacaacatcgtcaacaacgcctattttgtgggtcttcgtctg
ggattcaactggaagcctataagagcgtgtgttcctgttcctctgtaccactgcataggc
tcagtgatcggagggatgtgcatggcactgcatggcatcaccctggtcttcccctctgct
gggtatgacagccgtgccaacctggaggccattcagaatgaaaggtgtaatttcctctac
ggaactcctaccatgtacattgacatgcttggacagcctgacctacacaactatgacctg
tcatcagttgaatctgggtttacgggtgggtctctttgtcctcctgaagtcatgaggaaa
ctcagaactgatatgaatgtcaaggatatgataataggctatgggaccacagagaacagc
cctgcggcatttgttggttacccacgagacaacgaggaactgaagaccgagacagtggga
tgtatcctgaaccacgctgaggcgaaggtggtggatgtgtcctctggagaggtggttcct
ctgggggatccaggagagctgctgatcagagcttactctgttatgctggagtactgggac
gacccagacaagaccagtgaggctatcgccaaagaccgctggtacagaaccggtgacata
gccagtctggacaggtttgggtactgccgtatagtgggacgtataaaggacatgattata
cgtggaggagagaacatctaccctgctgagatagagaagttccttcacacccatcccaac
gtacaggaggcccaggtgattggcgtgagagatgagaggttgggggaacaggtgtgtgcc
tgtatcagactgaaggagggactggactgtagcagagaggagatcagaaacttctgcaag
ggacagatttctcacttcaagatcccccactatgtggtgtttgtggacagctatccactg
actgcctctggaaaggtccaaaagatcaaactgagggaggagatggagaagaagctgggt
ctgtga
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