Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421600
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Entry
139421600 CDS
T10872
Name
(RefSeq) BAR/IMD domain-containing adapter protein 2-like isoform X1
KO
K05627
BAI1-associated protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139421600
09142 Cell motility
04810 Regulation of actin cytoskeleton
139421600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421600
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139421600
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Gene cluster
GFIT
Motif
Pfam:
IMD
SH3_9
SH3_2
SH3_1
BAR
Peptidase_Mx1
Motif
Other DBs
NCBI-GeneID:
139421600
NCBI-ProteinID:
XP_071028752
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Position
12:89320939..89455323
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AA seq
569 aa
AA seq
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MVLTEDFKMSRTDEVHRITENVYKSIMEQFNPCLRNFVAMGKSYEKALSNVTFAAKGYFD
ALVRMGELASESQGSKDMGDVLFQMAEVHRQIQVQLEEMLKSFHNELLSELEKKVELDAR
YLTAALKKYQVEHKSKGESLEKCQAELKKLRRKSQGSKNPSKYGEKEMQFVETISSKQSE
LDTFIAEGYKTALSEERRRYCFLVDRQCAVAKNSSAYHGKGKDLLTQKIPVWQQACSDPN
KLPERAMLLAQQMGSGSSTGTASLTMGGSSPLNTSKSNLSNLVISDPIPGAQPLPVPPEL
AVFMGGGLGHQARLMGSDGMSMVNGTTGLHGEEEYWTEGGVSVSQLQGRPSSPQAPSLPQ
GQAPTQRQVSEHYSNTLPVRRPQPAKNKTSVGETRTLPRSSSMAAGLEKNGRARVQAIFS
HAAGDNSTLLSFSEGDVITLLVPEARDGWHYGENEKNKMRGWFPFSYTRVLPESEKEKLQ
VNLHHGKSSSTGNLLESDMSLPMPDYGLTARLLAQSLAQSRPRPYSMAGFTTQPALEDYD
SRFAAASDRALEIYFRQPINDDRSAPIFY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggttttgaccgaagatttcaagatgtctcgcaccgacgaggttcaccgcataacggag
aatgtctacaagtccatcatggaacagttcaacccctgcttgcggaacttcgttgccatg
gggaagagctatgagaaggccctatccaatgtgacgtttgctgctaagggctactttgat
gccctggtgaggatgggagagctagccagtgagagccagggatccaaggacatgggggac
gtgctgtttcagatggctgaggtccacagacagatccaagtacagctagaggagatgctg
aagtctttccacaacgagctgctgtctgagctggagaagaaggttgagctggatgctcgt
tacctgacggctgcgttgaagaagtaccaagtggagcacaagagtaagggagagagtctg
gagaagtgtcaggctgaactgaagaaactccgcaggaagagccagggcagcaagaacccc
tccaagtacggagagaaggagatgcagtttgtggagaccatcagcagtaagcagagtgaa
ctggacaccttcatagcagagggctacaagactgctctgtctgaggagcgcaggaggtac
tgtttcctggtggacagacagtgtgctgtggccaagaacagcagtgcctaccacggcaag
ggtaaagacctgctgacccagaagatcccagtatggcagcaggcttgttcagaccccaac
aagctaccagagcgggccatgctcctagcccagcagatgggctccgggtccagcacgggc
accgcttccctgaccatggggggctccagccccctgaacacctccaagtctaacctgtcc
aacctggtcatctctgaccccatccccggggctcagccactccctgtccccccagaactg
gctgtcttcatgggtggtgggctggggcaccaggcgaggctgatgggttcagatgggatg
tccatggtgaacggtacgacaggactccacggagaggaagagtactggacagaggggggg
gtgtcagtctcccagctccaaggaagaccctcctccccccaggccccttccctaccccag
ggacaggcccccacccagagacaggtcagtgagcactactccaataccctgcccgtccgc
aggccccagcctgccaagaacaagacctctgttggtgagacccgtacccttcccaggtct
agctccatggcagcggggctggagaagaacggtcgtgcccgtgtccaggccatcttctcc
cacgcggccggagacaacagcaccctgctcagcttctctgagggagacgtcatcaccctg
ctggtcccagaggcccgtgacggatggcactatggggagaacgagaagaacaagatgcgt
ggctggttccccttctcttacacacgggtgctgccagagagtgagaaggagaagctccag
gtgaatctgcaccatgggaagagcagcagtaccgggaacctgctggagagcgacatgtct
ctgcccatgcccgactacggcctgactgcccgcctgctggcacagagcctggcacagagc
agacccaggccctacagcatggcaggctttaccacacagcctgcccttgaggactatgac
agtcgctttgctgctgcaagtgaccgagccctggagatttacttcagacaacccatcaat
gatgacagatcagcccctatattctactag
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