Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421639
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Entry
139421639 CDS
T10872
Name
(RefSeq) periplakin-like isoform X1
KO
K10386
periplakin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139421639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139421639
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139421639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plectin_PPL
SR_desmoplakin_3
Spectrin_1st_PEPL
SH3_10
Plectin
ERM_helical
SR_plectin_7
Spectrin
Motif
Other DBs
NCBI-GeneID:
139421639
NCBI-ProteinID:
XP_071028807
LinkDB
All DBs
Position
12:90936313..90980465
Genome browser
AA seq
1755 aa
AA seq
DB search
MFKKKPSKSVTITQTKKAPSSELSALIEKLQKNADKVEKLILETEQNLNKDVSKINEGKQ
PLYQDDTNKRILSSLELLQGLDEDAVDAKRLQHPQAEMIEQDMKQLRVRLRKLREDHDRI
YHLTRSEGLPSVNWGRIIEEKQGNLSNKGFGQDLPTIENEVEEHNIFHSEVEALAPHISA
SDDKDSASALQLKYNKLLASSSARQRHLLSLRDYMQRCTNELYWMDQQAGERINYDWSDT
NLDYPARHRQYENFISKCLESKEATVTKLNDDGDKLIAANHPGKNVIEAHMEAVHADWKE
YLNLLICEENHLKHMDEYHKFHKEARDTQDLLKRMDKEVDQKYKPEFKDMYQMESLIRDL
DDQAKAMDHFDERVKALEKRSLQVLPLQFRRNTPQKLLPVEALCEFDTDEGQILRGERYT
LLSNKGPKWEVKDAAGRKLTAPGACFMVPPTDPESVAVSNSLAGQQKGIKMKVSGSKTTL
VKRLEELKKDGSAGSDKEEQQCRQLMAGLDKVTSDLDKQEKAIYSRVRPPLEQTRPLQDS
ADRLQDVKDIAAVVRKIEPEKSSKVREAEKFLTSNPKCASAPQLNGKVNEANNKYDKINL
LLKCSEDKLQNSNRLENSLQNGKSLLSSYENKLVREEVAPADISSLEKTQRQLADIASEL
KTKRSAVTETEANLRAAKGSCDTMATKLQEHCPDIERQEGEVRRLNKRYDNLNRQIDART
QSLQRAKTSYSNYRSDYDNLNNWLSRVPNYEPTEKDNLSQVETKLENQKNLLSDIKKKES
ELNNVSKNAQLYQQAVKDYENDTEKFKSLLDLEDGLVPQTYKRSRLESPALRVKEEESAI
EAKFTEVNAVNKQRMANLQFAQGLMNQQSDVIVSNNVQQVRSAAPGEEAWRIESQLKDEI
QRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDETRV
TRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELRRR
KTIKDNEVIQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLENEYRILLDRKQKEQEG
RKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRMQHEDEKAK
HRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRRYR
DADQQLKSHQDELKMLRNRGPQIEIKEIIKEVIKYKTDPQTERELEKLRNEIVDKTHQTE
KSEMEIRQLRDEIQRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKKRL
DLERERSANEEKIRLRKIDLSQVREKVVQQEVVKMEEDPLLRSECSTFTQNINNEQRQRE
TLKEELFQLQKQKANLDAQLEELERERRARRDAELEIQRLRVRLNEMELRDKENRERVTV
KQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERMVVKEKVVRTE
TIQVEKDPEAELEIEKMTRTLEQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDYIR
DESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMESGKNLELRLGSLQRELAEL
RAITSQKDDEIEKLQKSLSAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLIDW
KMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIEDALRAGNITNRQLQQYHDKE
ITIQEFGVMVSGKTK
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaaaccctcgaagagcgtgaccatcacgcaaacgaaaaaggcgccctcc
tccgagctgtctgcactgattgagaagctgcagaagaacgctgacaaggtggagaagctc
atccttgagacggagcagaacctcaacaaggatgtgagtaagatcaacgagggcaagcag
cctctgtaccaggacgacaccaacaagcgcatcttaagctctctggagctgctgcaaggc
ctggatgaggacgccgttgacgcgaaacgcctgcagcacccccaggctgagatgattgag
caggatatgaagcagctgagagtgagactaaggaagctgagagaggaccacgaccgcatc
taccacctgacgcgttctgagggcctgccgagcgtcaactggggcaggatcatagaggag
aaacagggcaacctgagcaacaagggttttggtcaggacctgcccaccatagagaacgag
gtggaggaacacaacatctttcacagtgaggtggaggccctggcccctcacatctcagcc
agcgacgacaaggactctgccagtgccctccagctgaagtacaacaagctcctggccagt
tccagtgctcgacagcgccacctgttgagcctgcgcgactacatgcagcgctgcactaat
gagctgtactggatggaccagcaggcaggggagaggatcaactatgactggagcgatact
aacctggactaccctgcacgtcacagacagtatgagaacttcatcagtaagtgtctggag
tccaaggaggccactgtcaccaagctgaatgatgatggagataaactcatcgctgccaac
catcctggcaagaatgttattgaggctcatatggaggctgtgcatgcagactggaaggag
tacctgaacctgctcatctgtgaggagaaccacctgaaacacatggacgaataccacaag
ttccacaaagaggcccgggacacccaggaccttcttaagagaatggacaaagaggtggac
cagaagtacaaaccagagttcaaggacatgtaccagatggagagcctcatcagagacctg
gacgaccaggcgaaggccatggaccactttgatgagcgtgtgaaggctctggagaagcgc
agtctacaggttctccccctccagttccgcaggaacacccctcagaagctgctccccgtc
gaggcgctgtgtgagttcgacactgacgagggtcagatcctgcgtggagagaggtacacc
ctcctgagtaacaaggggcccaagtgggaggtgaaggacgcggccgggcgtaaactgacg
gctccgggggcctgcttcatggtcccccccacagacccagagtctgtcgccgtctccaac
agtctggccggccagcagaagggtattaagatgaaggtgtctggcagtaagaccaccctg
gtcaaacgcctggaggaactgaagaaagacggctccgctggctctgacaaggaggagcag
cagtgtcgccagctgatggccggtctggacaaggtgaccagtgatctggacaaacaggag
aaggccatctactctcgagtacgcccccctctggagcagaccaggccgctgcaggacagc
gctgaccgtctgcaggacgtcaaggacattgcggccgtggttcgtaagatcgagccggag
aagtcgtccaaggtgagggaggctgagaagttcctgacctctaaccctaaatgtgccagc
gcccctcagctgaacggcaaggtgaacgaggccaacaacaaatacgacaagatcaacctg
ctgctcaagtgctccgaggacaagcttcagaattccaaccgcctggagaactcccttcaa
aacgggaaatctttattgtccagctacgagaacaagctggtcagggaggaagtcgcccca
gcagacatctcatctctggagaagacacagcgtcaactggctgatattgcatcagagctg
aagaccaagaggtccgcggtgacggagacggaagctaacctgcgtgcggccaaaggcagc
tgtgacaccatggcaaccaagctgcaggagcactgccccgacatcgagaggcaggagggc
gaggtccggagacttaacaaacgctacgacaacctcaacaggcagatcgacgccagaact
cagagcctgcagagggctaagacgtcgtacagtaactaccgcagtgactacgacaacctg
aacaactggctgtcccgcgtgccaaactatgagccaactgagaaagacaacctcagtcag
gtggaaaccaagctggaaaaccagaagaacctgctctccgacattaaaaagaaggagtct
gagttgaacaacgtatcgaagaatgcccaactttaccagcaagccgtcaaggactatgag
aatgatactgagaagttcaagtctcttctggaccttgaagacgggctggtcccgcagacc
tacaagagaagcagactggagtcccctgcactcagggtcaaggaagaggaatctgccatt
gaagctaaattcaccgaagtgaatgccgtgaacaagcaaaggatggcgaatctgcagttt
gcacaaggccttatgaatcagcaatcagacgtgatcgtcagcaacaatgtccaacaagtc
agatctgccgctccaggagaagaagcctggaggatcgagagtcaactgaaagacgagatt
cagaggagggagcagctggagaaggatctagagaaaatccagacggacatctacatgttg
gagggccagaagccggaggacaccgtcgtcaagaaggagatcatcaagaaggttccggat
ccgactctggtcgacgaggtccacaatgtccgtcagaaactgtcagacgaaacccgggtc
acccgggccatggacaacgagctggaggcactgaggctgaagctgcgtggcatcgaaaca
gagatcaaagaaggagcacagcagtacaccgtgaaggaggtgctgcgtatcgagagggac
cgcggccaggaggaggaggtgaggaggctcagggaggagctggaagaactgaggaggagg
aagaccatcaaggacaacgaggtgatccagatcaccaagcaggtgacgctcctggcacag
cagaagtccaaggagcaggaggtgatcacagaggaggaggtgattaaagtgcaaaacgac
ccgcaactggagaacgagtaccgcatcctcttggacaggaagcagaaagagcaggagggc
aggaagcaactggaggacgagctgcgcttcctccaggacaagctccgcaggctggagaag
gagaagtccatggccgaggagaagatctccatcaaggaggtgctgaaggtggagaaggat
atcgcctttgagagggaggtagagaatctcaggatgcaacatgaggatgagaaggccaag
caccggtcttcccaaagggagcgcgccgacctccagaggaagatctccagcctagaggag
gaaaagtcaagggtcatagttcaggagaaggtgagggagatcgtcaggcctgaccccaag
gctgaggctgaagtggccaacctacgcatggaactggtggaacaccagaggaggtacaga
gacgccgaccagcagctgaagtcccaccaggacgagctgaaaatgctgagaaacagaggt
ccgcagatcgagatcaaggagatcatcaaggaagtcatcaagtacaagacggacccgcag
accgagagggagctggagaaacttcgcaacgagattgtggataagacgcaccagacggag
aagtcagagatggagatcaggcagctgagggacgagattcagcggtggaaggacaccaag
ccacaggtgcaaattaaagaggtggttaacgaggtgctggagtacaaagaaaaccccaag
accaaggaggagattgagatcctgaagaggaagctggcggacgagcagaagaaacgtctg
gacctggagagggagcgatcagctaatgaggagaagatccggctaaggaagatcgacctg
tcccaggtcagagagaaggttgtccagcaggaggtggttaagatggaggaggacccatta
ctgaggtcagagtgcagcaccttcacacagaacattaacaatgaacagaggcagagggag
accctgaaagaggagctcttccaacttcagaagcagaaggccaacctggacgcacagctg
gaggagctggagcgagaacgccgagctcggcgcgatgcagagctggagatccagaggctg
agggtcaggctgaacgagatggagctcagggacaaggagaacagggagagggtcacagtg
aaacagatggtggttctccagcaggacccccagcaagagaaagagcactccatcctcaag
ctgcaggtggaggaggagagacacaagcgcaccctgctggagaaggagctgaacgtcctg
ctccagcagcaggtcaccctggagaggatggtggtgaaggagaaggtggtgcgcaccgag
accatccaggtagagaaagacccggaggctgagctggagatcgagaagatgacgaggacg
ctggaacaggagaagaggaggaggctcgagctggaccaggagctgggcagcctcaagtcc
cgcctgtccgacatggagttcaccaacaccaagtcgtccaaggagctggactacatccgc
gacgagagcagtcgcctccagcaggagaaccagaggctacagaatgacatccgcaggctg
cagtccgagatccagatcacctccacggagacccggagcatctccaactcggcccccatg
gagagcgggaagaacctagagctgaggctgggctcactgcagagggagctggccgaactg
agggccatcaccagccagaaggatgatgagatcgagaagctacagaagagcctgtcagcc
atccagatcaagagggagcagagggagagccacctgaggagatccatcgtggtcatcgac
cccgactcgggtaaggagatgaggccagaggaggcctacaaactggggctgatcgactgg
aagatgtttgtgaacctccagagccaggagtgcgactgggaggagatcagtgtcaagggc
cccaagggggagtcctcggttctccacgacaggaagtctgggaagaagttctccattgaa
gacgccctgagggctgggaacatcaccaaccgccagctgcagcagtaccatgacaaggag
atcaccatccaggagttcggagtcatggtgtcggggaagaccaagtga
DBGET
integrated database retrieval system
