Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421644
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Entry
139421644 CDS
T10872
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139421644
04136 Autophagy - other
139421644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421644
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139421644
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
139421644
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139421644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_NWD2_C
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
139421644
NCBI-ProteinID:
XP_071028826
LinkDB
All DBs
Position
12:complement(91187341..91220225)
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AA seq
463 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPGTELTGLGCASFNQDSTSLAVGTKTGYKLFSVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVY
DANNLSTVTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKR
YVNISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLP
AQVSGVMSQERAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFIYNVDPQDGGEC
VLAQKHRLFGEDEDKEEGVESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGG
AKKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTRGGQGRRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagcagacggtcctagcggaccgggtgaaccgggagccgggccg
gggacggagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattggca
gtgggaaccaagacaggctataagctgttctctgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagacgtgtacatcgtggagcggttgttctccagcagtctg
gtggtggtggtcagtctctccatccccagacggatgaacgtctaccacttcaagaaggga
acggagatctgcaactacagctacagtaacaacatcctctctgtcagactcaacagacag
aggctggtggtgtgtctggaggagtcagtgtacatccacaacatcaaagacatgaagctg
ctgaagacccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcgtacctggcctacccaggcagctccaccatcggagagatcatagtttac
gatgccaacaacctgagcactgtcacaatgatcccggcccatgacagtcccctggctgct
ctcaccttcaactcgtcaggcaccaagctggccagcgcctcggagaggggtactgtaatc
cgtgtgttctccatcccagagggacagcgtctgtttgagttccgcagagggatgaagagg
tacgtcaatatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagc
aacactgagaccgtacacatcttcaaactagaacagcacggacccagtggagaggaggag
tgtcctacctggggatcctacgtagggaagatgttctctgcagccagcagctacctccca
gcccaggtgtctggcgtgatgagtcaggaaagagccttcgccactgtacgcctcctagtg
gccgggcagaggaacgtctgtaccctcgccacgatccagaagctccctcgtctgctggtg
gcttcctccgacggacagctgttcatctataacgtcgatccccaggatggaggagagtgc
gtcctggctcagaaacacagattgtttggtgaggatgaggacaaggaggaaggggtggag
tcagaagggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgtt
gccataccagccaccggtccagtcactaccacgctcacaggttactctgaggatggtggg
gctaagaagggagaggtgatcccagaacatgagtttgccgctggtcccgtctgtctggat
gatgagaacgagtttcctccaataaattggtgccgcgacggaactcgaggtggccagggg
cgtcgtctgtga
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