Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421684
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Entry
139421684 CDS
T10872
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139421684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421684
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139421684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Lgl_C
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
139421684
NCBI-ProteinID:
XP_071028876
LinkDB
All DBs
Position
12:complement(94663394..94738804)
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AA seq
1062 aa
AA seq
DB search
MMKFRFRRQGNDPQREKIKQELFAFNKTVEHGFPHQPCALAFDPQLQLMAIGTKSGAIKI
YGSPGVEFTGLHRDAAAVAQIHFLQGQGRLLSLLDDNTLHLWELGGASRDRGGAKSEGVV
YLEEKRNYSVLGRPGLESCSASRVTVLLLLSSCDLLCVGTEGGGIHFLDLPRLSLRDNQS
LLLDQVMQSIPEDYRCGKSLGPVESLQEHPKQPGKILIGYSRGLVVLWDLSTRNAEHMFL
GKQQLESLVWERSGSSFVSSHSDGGYSVWAVASGNTYTHQPVSSSIPYGPFPCKAINKIL
WRTIQSGCPVVLYSGGMPRASYGDRHCVTIQQDKQHVTLDFTSRVIDFFTVHTTDPEHDY
DDPKALVVLLEEELVVIDLLTTGWPSVPPPYLAPLHSSAITTSCHLDNVPAKLWDRLAAA
GNSQGAQPGVRHAHGSWPICGGKNLAPPPRQQELLLTGHEDGTVRFWNVSAVAMTPLYKL
STANVFHTDCDPNDDPLDPTNDPEALQEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYS
CRLVVAGTAGQVIVLGLSDEWSDHTVDVSTVDLLQDREGFTWKGHDRLEPRASPAPFPPG
FQPLVLVQALPPASVTSVMLHAEWNLVAFGTSHGFGLFDYHRRTAVLARCTLHPNDSLAM
EGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRPIPTPTSKIQEANAALADQEEVAPVQRRI
EPRSADDSLSGVVRCLCFADTYLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGSGRGRPG
GEGSGCVEAVLGKEIQLMHRAPVVSVCVLDGRGKPLPEPYQASLDLATAPDMTNPHSVLI
ASEEQLKVFSLPKVGAKTKFKLTAHEGCRVRRVAMVTVYSTAQEDYSETSLVCLTNLGDL
HLFNVPALRPQVRYDCIRKEDISGIASCVFTRNGQGFYLISPSEYQRFSLSAKVITEPLC
TVELERPLETHISDDAAMPLRANGTHRNQAEGLNEDPQCGLSSPPPLSPLDSPLSMADVS
LDTTGELTVEDVRDFLTSVDEVENNLRNITEEDGCSLGVLIT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggttccgtcggcagggcaacgacccacagagagagaaaattaaacag
gaattgttcgccttcaacaagaccgtggaacatgggttcccccaccagccctgtgctttg
gcctttgacccccagctgcagctcatggccatcgggaccaagtctggagccatcaagatt
tatggatctccaggggtggagtttacaggactacacagagacgctgcagccgtagcgcag
atacacttcctccaaggacagggccgtctgttgtcgctgcttgatgacaacacgctgcac
ctgtgggagctgggcggagcttcccgggacaggggaggggctaagagcgagggtgtggtc
tacctggaagaaaaacgcaactacagtgtcctgggacgacctggactagagagctgcagt
gcaagccgtgtgacagttctgctgttgttgagttcatgtgacctgctgtgtgtcggcacc
gagggagggggcatacacttcctggatctgccacgcctctcgttgagggataaccaatca
ctcctgctggaccaggtgatgcagagcatacctgaggactacaggtgtgggaagtctctg
ggaccggtggagtcgttacaggaacaccccaagcagccagggaagattctgattggctac
agcagaggcctggtcgtcctatgggatctcagcacccgcaacgcagaacacatgttcctg
ggaaaacagcagctggagtccctggtgtgggaacgttccggtagctccttcgtcagttcc
catagcgacggggggtacagcgtgtgggctgttgccagtggtaacacgtatacacaccag
cctgtgtcctcgtccatcccctatggtccgttcccttgtaaagccatcaacaagatctta
tggaggacgattcagtcagggtgtccagtagtcctctacagtggaggaatgcccagggcc
agttatggagaccgtcactgtgtgaccatccaacaggacaaacaacacgtcactctagac
ttcacatccagagttatagacttcttcaccgtccacaccactgacccggagcacgactat
gatgatcctaaagccctcgtggtgttactagaggaggagctggttgtaatagacctcctg
accaccgggtggccctctgtccctcctccttacctggctccgctccactcctccgccatc
accacatcctgccacctggacaacgtccccgccaagctctgggaccgcctggccgccgcc
gggaacagccagggcgctcagcctggagtgagacacgcacacgggagttggccgatatgt
ggaggaaagaatctagcgcccccgcccagacaacaggagttgctgctgacggggcatgag
gacggtacagtgcggttctggaatgtgtctgctgttgccatgactcctctctacaagctc
agcacggctaacgtcttccataccgactgtgaccctaacgacgaccccctggaccctacc
aatgaccccgaagcactgcaagaggaggagtggcctcccttcaggaaggtgggctgtttt
gatccgtatagtgatgatcctcgtctggggatccagaagatcagtctgtgtaaatacagc
tgtagactggtggtggccgggaccgctggacaggtgatcgtactgggtctgagtgatgaa
tggtcggaccacacggtcgatgtctccacggtcgacctgcttcaggaccgagaggggttc
acctggaagggccatgataggctggagccccgagccagccccgcccccttccctccaggc
ttccaaccattggtcctggtgcaggccctgcccccagcctctgttacctccgtgatgctg
catgcggagtggaacctcgtagcgttcgggacgagtcacggcttcggactgtttgactac
cacagacgcactgctgttctggccaggtgtaccctgcaccctaacgactccctagcgatg
gagggtcctctcagcagagtgaagagtctgaagaagtctctcagacagagcttcagacgc
atcaggaagagtagagtgtctgggaagaaacgccccatccccacccctaccagcaagatc
caggaggccaacgcagcgctagctgaccaggaggaagtagctccggtgcagaggaggatc
gagccgagatcagctgacgactctctatcaggagtggtgcgatgcctctgtttcgctgat
acgtacctccgagacggtacacaccacggcccgacgctgtgggcggggacaaactcaggg
agtgtgtatgcttacgcgttggaggtcccgggtgtggggtcgggccgtgggcggccgggg
ggtgaggggagcggctgtgtggaggccgtgttggggaaagagatccagctgatgcacagg
gctccggtcgtgtccgtctgcgtgctggacggacgggggaaaccgttaccagaaccttac
caagcctctctggacctggctactgctccagacatgactaacccacactctgtcctcatc
gcttcagaggaacaactcaaggtgttcagtcttcctaaggtcggtgcgaagaccaagttc
aagctgacggctcatgagggttgtcgtgtgcggagggttgccatggtgactgtgtattcc
acggcccaggaggactacagtgagaccagtctggtctgtctgaccaaccttggagacctg
cacttgtttaacgtacctgccctacggccacaggtacgttatgactgtatccgtaaagag
gacatcagtggcatcgcttcctgtgtcttcacaaggaacgggcaggggttctacctgatc
tctccatcagagtaccagcgtttctccctgtcagctaaagtcatcacagaacctctatgt
actgtggagctggagagacctctggagacacacatcagcgacgacgcagccatgcctctc
cgggccaacggaactcaccggaaccaggctgaagggttaaacgaggacccccagtgtggc
ctgtcctccccgcctcccctctcccctctggactcccccctcagcatggctgacgtcagc
ctggacaccaccggagaactcactgtagaggacgtcagggacttcctcacttccgtggac
gaggtagagaataacttgaggaacatcacagaggaggacggatgctctctaggagtcctg
atcacctga
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