Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421688
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Entry
139421688 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139421688
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139421688
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139421688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2_4
zf-C2H2
Zn_ribbon_IFT122
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
139421688
NCBI-ProteinID:
XP_071028883
LinkDB
All DBs
Position
12:complement(95150892..95176750)
Genome browser
AA seq
1022 aa
AA seq
DB search
MESTSNNYERNCVLCCQELDIFALGKCDHPVCYRCSTKMRVLCDQKYCAVCREQLDKVLF
VQKLVAFSSQPLQTLQVERKHDIYFTDSKIYAQFRTLLQSECPVCPESKVFSKFEELEQH
MRKQHELFCCKLCTKHLQIFSHERKWYNRKDLARHRTHGDPDDTSHRGHPLCKFCDDRYL
DNDELLKHLRRDHYFCHFCDADGAQEYYSDYQYLSEHFREAHYLCEEGRCATEQFTHAFR
SQIDYKAHKASAHSKNRAEARQNRHIDLQFSYAPRQTRRNDGGMVSGEDYEEARSGRGGR
GRSQGNQPNTRGSWRYNREEEDRELAVAVRASLMQQRRQEDGGRDTQDRSAAPKHRKEER
MERPERMERPERMERPERMERPERMERPERMERPERMERPERMERMERPERMERPERMER
PERMERPERMERPERMETEERHRSVPIKPPAEAPPVRTMKSNPLTGDDFPALLGAAAPTL
SVKPPPALKTPAQVPLKEDDFPSLSAAMVMTPMTPAYSAQPRKHSSFQEEDFPALVSKIR
PPRPAGGATSAWSQASSSNTSKTVILPSSSSRPPPNNPPLPLPAGPQLLSSSSSSRRKKH
PIRRPSPPSDDDNCVAKTMQEHRAVPTMLDISSLLIVKGPSKSVSKPLPLTAKPLPPTAK
PPPLTDKPLPLTSKPSPVTSNPTPIPAPSPTSKTAKKKKQATPPPSSFGNQVPVLMETVS
RVQKENVPESHASKPLVAMTTATVKTAVKAKVKASGLANGHLDKPVTVAPLPKAQPEPPL
EVEEEFPALISKKPPPGFKSSFVLKSSAPRSNLSPPRPGQGSATPPSKPPPGFTGIPLNS
NVVEPAPPASSPRSPQSPGVYLAPENFQQRNMELIQSIKNLLQNDQSRFNQFKDYSGQFR
QGLMTAVLYHQSCRTLLGDNFGGVFNELLVLLPDTRKQQELLTAHADDRAMERQGGGGTR
KNRKSAWQTPSSAISNAAALDCQVCPTCCQVLDPKDFNSHKTLHLGDNEDFPSLQDISRI
IS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaacatctaacaactacgagcggaactgtgttctgtgttgtcaggagctcgac
atcttcgccctggggaaatgcgaccacccggtgtgttaccgctgctcgaccaaaatgagg
gtgctgtgcgaccagaagtactgcgccgtgtgccgggagcagctcgacaaggtgctgttt
gtgcagaagttggtggcgttctcctctcagcccctccagacgctgcaggtggaaaggaaa
catgacatctactttacagactccaagatatacgctcagttcaggacactgctgcagtct
gagtgtcctgtgtgtccagagtctaaagtcttctcaaagtttgaggagttggagcagcac
atgaggaaacagcatgaactcttctgttgcaaactctgtaccaaacacctgcagatcttc
tcccatgagaggaagtggtataaccggaaggatctggcacgtcaccgcacccatggtgac
ccagatgacacgtctcaccgcggacacccgctctgcaagttctgtgatgaccgttacctt
gacaacgacgagctgctgaaacaccttcgtagagaccattacttctgtcacttctgtgat
gctgacggagcccaggagtactacagtgactaccagtacctgagcgaacacttccgggag
gcccactacctgtgtgaggaggggcgctgtgctacggagcagttcacccacgccttcagg
agccagatcgactacaaggcccacaaggcctcagcacacagcaagaaccgagccgaagca
cgacagaaccgacacatagacctgcagttcagctatgcccctcgccagacccgacgcaac
gatggaggcatggtgtctggagaggactatgaggaggcgaggtcgggtcgggggggaaga
ggaaggagccaagggaaccaaccgaacaccagaggtagctggagatacaaccgtgaggag
gaggacagggagttggcagtagcagtcagagcctctttgatgcagcagaggagacaggag
gacggaggacgagacacccaggacaggagcgcagcgcccaaacaccgcaaagaggagagg
atggagaggcccgagcggatggagaggcccgagcggatggagaggcccgagcggatggag
cggcccgagcggatggagcggcccgagcggatggagcggcccgagcggatggagaggccc
gagcggatggagcggatggagaggcccgagcggatggagaggcccgagcggatggagcgg
cccgagcggatggagcggcccgagcggatggagcggcccgagcggatggagactgaggag
agacacaggagtgttcctatcaaacctccagcagaagctcccccagtgaggaccatgaag
agtaaccctctgacaggagacgactttccagctctcctgggggctgcagcacccacactg
agtgtaaagccccccccagccctgaagactccagcccaggtccctctgaaggaggatgac
ttccccagtctatctgctgccatggttatgacccccatgacccctgcctactccgcccaa
cccaggaagcactcctccttccaagaagaagacttccccgccctggtctctaagatccgc
cctcccagaccagcgggcggagctacctcagcctggagccaagccagcagcagcaacacc
tccaagacggtcatccttccctcctcttcctctagacctccccctaacaaccctcctctc
cccctccccgccggcccccagctcctctcctcctcctcttcctctcggaggaaaaagcac
cccatccgccgcccctcccccccatctgatgatgacaattgcgttgccaagacgatgcag
gagcaccgagcagttccaaccatgttggatatctcctctcttctcatcgtcaaaggaccc
tctaaatctgtctctaagcccctcccattgacagctaagcccctcccaccaaccgccaag
cctcccccactgacagataagcccctcccactgacctctaagccctcccctgtgacatct
aaccccactcctattcccgccccaagccccacatccaagacagccaagaagaagaaacag
gccacgccccctccgtcatcatttgggaaccaagttcctgtcctcatggaaacggtctcc
agggtacagaaggagaacgttccggagagccacgcctccaagccactggttgctatgacg
acggcaacagttaaaaccgctgtaaaagcaaaggtcaaagcaagtggattggctaacggc
cacctggataaaccagtcacagtggcccccctccctaaagcccagccggaaccccccctg
gaggtagaggaggagttccctgccctcatctccaagaaacctcccccaggctttaaaagt
tccttcgtcctgaagagttctgccccccgcagtaacctgtccccccctcgccccggccag
ggcagcgccacccctcccagtaagccccccccagggtttaccggcatccccctcaacagc
aacgtggtggagcctgccccccctgcatccagcccccgctctccccagtccccgggggtg
tacctggctccagagaacttccagcagaggaacatggaactgatccagtccattaagaac
ctcctgcagaacgaccagtcacgattcaaccagttcaaggactactctggacagtttaga
cagggtctgatgacagccgtgctgtaccaccagagctgtaggactctgttaggggacaac
tttggcggcgtcttcaatgagctgctggtgctacttcctgacacgaggaaacagcaggag
ctgctgacggcccacgcagacgaccgggccatggaaagacagggagggggcgggaccagg
aagaacaggaagagtgcctggcagaccccctccagcgccatctctaatgcagccgcgctg
gactgccaggtatgccccacctgctgccaggtgctggaccctaaagacttcaactcccat
aagaccttgcacctgggggacaacgaggacttcccctccctgcaggacatcagccgcatc
atcagctag
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